Research Publications

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Year	Publications
2016	Clark, N.M., Hinde, E., Winter, C.M., Fisher, A.P., Crosti, G., Bliou, I., Gratton, E., Benfey, P.N., Sozzani, R. Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy. eLife 2016;5:e14770. DOI: http://dx.doi.org/10.7554/eLife.14770
2016	Conway, J.M., Pierce, W.S., Le, J.-H., Harper, G.W., Wright, J.H., Tucker, A.L., Zurawski, J.V., Lee, L.L., Blumer-Schuette, S.E., Kelly, R.M. Multidomain, Surface Layer-associated Glycoside Hydrolases Contribute to Plant Polysaccharide Degradation by Caldicellulosiruptor Species J. Biol. Chem. 291, 6732-6747.
2016	De Luis Balaguera, M.A., Ramos-Pezzottia, M., Rahhala, M.B., Melvin, C.E., Johannes, E., Horne, T.J., Sozzani, R. Multi-sample Arabidopsis Growth and Imaging Chamber (MAGIC) for long term imaging in the ZEISS Lightsheet Z.1. Developmental Biology, in press.
2016	Slattery, R.A., Grennan, A.K., Sivaguru, M., Sozzani, R., Ort, D.R. Light sheet microscopy reveals more gradual light attenuation in light-green versus dark-green soybean leaves. J. Exp. Botany, in press. doi: 10.1093/jxb/erw246
2016	Allen, T.A., Gracieux, D., Talib, M., Tokarz, D.A., Hensley, M.T., Cores, J., Vandergriff, A., Tang, J., de Andrade, J.B.M., Dinh, P.-U., Yoder, J.Y., Cheng, K. Angiopellosis as an Alternative Mechanism of Cell Extravasation. Stem Cells, in press.
2015	Han S.W., Alonso J.M., Rojas-Pierce M. REGULATOR OF BULB BIOGENESIS1 (RBB1) Is Involved in Vacuole Bulb Formation in Arabidopsis. PLoS ONE 10(4): e0125621. doi:10.1371/journal.pone.0125621
2015	Stowe, S.D., Thompson, R.J., Peng, L., Su, Z., Blackledge, M.S., Coe, W.H., Johannes, E., Lapham, V.K., Mackenzie, J., Melander, C., and Cavanagh, J. Membrane-Permeabilizing Activity of Reverse-Amide 2-Aminoimidazole Antibiofilm Agents Against Gram-Negative Pathogen, Acinetobacter baumannii. Current Drug Delivery, 12(2): 223-230.
2014	Yu, Z., Gwak, K.S., Treasure, T., Jameel, H., Chang, H.M., Park, S. Effect of Lignin Chemistry on the Enzymatic Hydrolysis of Woody Biomass. ChemSusChem 7, 1942-1950 DOI: 10.1002/cssc.201400042.
2014	Zheng J., Han S.W., Rojas-Pierce M. Multiple vacuoles in impaired tonoplast trafficking3 mutants are independent organelles. Plant Signaling and Behavior. 9:10, e972113, doi: 10.4161/psb.29783 e29783.
2014	Zheng J , Han S.W. , Rodriguez-Welsh M.F. and Rojas-Pierce M. Homotypic vacuole fusion requires VTI11 and is regulated by phosphoinositides. Molecular Plant. 7:1026-1040.
2014	Jiang T., Mo, R., Bellotti A., Zhou J., Gu Z. Gel-Liposome-Mediated Co-Delivery of Anticancer Membrane-Associated Proteins and Small-Molecule Drugs for Enhanced Therapeutic Efficacy. Advanced Functional Materials, 24(2295).
2014	Carrell, S.N., Reeves, G.T. Imaging the Dorsal-Ventral Axis of Live and Fixed Drosophila melanogaster Embryos. Methods Mol Biol, 1189: 63-78.
2014	Tai W., Mo R., Lu Y., Jiang T., Gu Z. Folding Drug-Pending Segment into Nanocarriers for Co-Delivery of Anticancer Drugs. Biomaterials, 35(7194).
2014	Mo R., Jiang T., Gu Z. Enhanced Anticancer Efficacy by ATP-Mediated Liposomal Drug Delivery. Angewandte Chemie International Edition, 53(5810).
2014	Selote, D. R. Samira, A. Matthiadis, J. Gillikin and T.A. Long Iron binding E3 ligase mediates iron response in plants by targeting bHLH transcription factors. Plant Physiology 167(1):273-86.
2014	Popovici O.A., Mikó I., Seltmann K.C., Deans A.R. The maxillo-labial complex of Sparasion (Hymenoptera, Platygastroidea). Journal of Hymenoptera Research 37, 77-101.
2014	Shen W., Dallas M.B., Goshe M.B., Hanley-Bowdoin L.SnRK1 phosphorylation of AL2 delays Cabbage leaf curl virus infection in Arabidopsis.Journal of Virology 88: 10598-612.
2014	Hung, C.-Y., Umstead, M.L., Chen, J., Holliday, B.M., Kittur, F.S., Henry, R.J., Kurkey, K.O., Xie, J. Differential expression of a novel gene EaF82a in green and yellow sectors of variegated Epipremnum aureum leaves is related to uneven distribution of auxin. Physiologia Plantarum 152: 749–762.
2014	Mo R., Jiang T., DiSanto R., Tai W., Gu Z. ATP-Triggered Anticancer Drug Delivery. Nature Communications, 5(3364).
2013	Liu X., Feng C.-H., Franks R., Qu R., Xir, D.-Y., Xiang Q.-Y. Plant regeneration and genetic transformation of C. canadensis: a non-model plant appropriate for investigation of flower development in Cornus(Cornaceae). Plant Cell Reports 32: 77-87.
2013	Ernst A, Mikó I, Deans AR. Morphology and function of the ovipositor mechanism in Ceraphronoidea (Hymenoptera: Apocrita). Journal of Hymenoptera Research.
2013	Rueschhoff, E. E., Gillikin, J. W., Sederoff, H. W., Daub, M. E. The SOS4 pyridoxal kinase is required for maintenance of vitamin B6 – mediated processes in chloroplasts. Plant Physiol. Biochem. 63:281-291.
2013	Mikó, I., L. Masner, E. Johannes, M. J. Yoder, A.R. Deans. Male terminalia of Ceraphronoidea: diversity in an otherwise monotonous taxon. Insect systematics and Evolution.
2012	Li Q., Lin Y.-C, Sun Y.H., Song J., Chen H, Zhang X.-H., Sederoff R., Chiang, V. Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa. PNAS 109(36) 14699-14704.
2012	Li Q., Lin Y.-C., Sun Y.H., Song J., Chen H., Zhang X.-H., Sederoff R., Chiang, V. Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa. PNAS 109(36) 14699-14704.
2012	Çakır, E., Khan, S.A., Foegeding, A. The effect of pH on gel structures produced using protein–polysaccharide phase separation and network inversion. International Dairy Journal 27, 99-102.
2012	Morioka S., Inagaki M., Komatsu Y., Mishina Y.,Matsumoto K., Ninomiya-Tsuji J. TAK1 kinase signaling regulates embryonic angiogenesis by modulating endothelial cell survival and migration. Blood 120, 3846-3857.
2012	Çakır, E.,Vinyard C.J., Essick, G., Daubert, C.R., Drake, M., Foegeding, E. A. Interrelations among physical characteristics, sensory perception and oral processing of protein-based soft-solid structures. Food Hydrocolloids 29, 234-245.
2012	Deans AR, Mikó I, Wipfler B, Friedrich F Evolutionary phenomics and the emerging enlightenment of arthropod systematics. Invertebrate Systematics 26: 323–330.
2012	Leksrisompong P.N., Lanier T.C., Foegeding E.A. Effects of heating rate and pH on fracture and water-holding properties of globular protein gels as explained by micro-phase separation. J Food Sci 77(2): E60-7.
2012	Rivera-Serrano E.E., Rodrigez-Welsh M.F., Hicks G.R., Rojas-Pierce M. A small molecule inhibitor partitions two distinct pathways for trafficking of tonoplast intrinsic proteins in Arabidopsis. PLoS ONE 7(9) e44735.
2011	Fulkerson, E. and Estes, P.A. Common motifs shared by conserved enhancers of Drosophila midline glial genes. JEZ Part B 316B, 61-75.
2011	McCullen S.D., Gittard S.D., Miller P.R., Pourdeyhimi B., Narayan R.J., Loboa E.G. Laser ablation imparts controlled micro-scale pores in electrospun scaffolds for tissue engineering applications. Ann Biomed Eng 39(12) 3021-30.
2011	Leksrisompong P.N., Foegeding E.A. How micro-phase separation alters the heating rate effects on globular protein gelation. J Food Sci 76:E318–27.
2011	Zhang, Y., Wheatley, R., Fulkerson, E., Tapp, A. and Estes P.A. Mastermind Mutations Generate a Unique Constellation of Midline Cells within the Drosophila CNS. PLoS ONE 6: e26197.
2011	Çakır, E., Foegeding, A. Combining protein micro-phase separation and protein–polysaccharide segregative phase separation to produce gel structures. Food Hydrocolloids 25, 1538-1546.
2010	McCullen, S.D., C.M. Haslauer, and E.G. Loboa Fiber-reinforced scaffolds for tissue engineering and regenerative medicine: use of traditional textile substrates to nanofibrous arrays (2010). J . Mater. Chem. 20, 8776-8788 DOI: 10.1039/C0JM01443E.
2009	Yang, X., Berry T.K., Foegeding, E.A. Foams Prepared from Whey Protein Isolate and Egg White Protein: 1. Physical, Microstructural, and Interfacial Properties. Journal of Food Science 74, E259-E268.
2009	Mikó I, Deans AR. Masner, a new genus of Ceraphronidae (Hymenoptera, Ceraphronoidea) described using controlled vocabularies. Zookeys 20, 127-153.
2007	Im, Y.J., A.J. Davis, I.Y. Perera, E. Johannes, N.S. Allen, W. F. Boss. The N-terminal membrane occupation and recognition nexus domain of Arabidopsis phosphatidylinositol phosphate kinase 1 regulates enzyme activity. J. Biological Chemistry. 282: 5443-5452.
2007	Im, Y.J., I.Y. Perera,, I. Brglez, A.J. Davis, J. Stevenson-Paulik, B.Q. Phillippy, E. Johannes, N.S. Allen, W. F. Boss. Increasing plasma membrane phosphatidylinositol (4,5)bisphosphate biosynthesis increases phosphoinositide metabolism. The Plant Cell, 19: 1603-1616.
2006	Nusz G., Johannes E., Allen N.S., Hallen H.D. Self-Assembled Monolayer Coating of Biological Probes to avoid Protein Adhesion. Nano BioTechnology 2, 61-65.
2005	Moyer-Henry K., Silva I., Macfall J., Johannes E., Allen N., Goldfarb B., Rufty T. Accumulation and localization of aluminum in root tips of loblolly pine seedlings and the associated ectomycorrhiza Pisolithus tinctorius. Plant Cell Environ 28, 111-120
2004	Busov V. B., Johannes, E., Whetten, R. W., Sederoff, R. R., Spiker, S. L., Lanz-Garcia, C. & Goldfarb, B. An auxin-inducible gene from loblolly pine (Pinus taeda L.) is differentially expressed in mature and juvenile phase shoots and encodes a putative transmembrane protein, Planta 218, 916-927.
2003	Allen N.S., Chattaraj P., Collings D.A. & Johannes E. Gravisensing: ionic responses, cytoskeleton and amyloplast behavior. Advances in Space Research 32, 1631-1637.
2003	Weerasinghe, R. R., Collings, D.A., Johannes, E. & Allen, N. S. The distributional changes and role of microtubules in Nod factor challenged Medicago sativa root hairs, Planta 218, 276-287.
2001	Johannes E., Collings D.A., Rink J.C. & Allen N.S. Cytoplasmic pH dynamics in maize pulvinal cells induced induced by gravity vector changes. Plant Physiology, 127, 119-130.