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Research Publications

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2016Clark, N.M., Hinde, E., Winter, C.M., Fisher, A.P., Crosti, G., Bliou, I., Gratton, E., Benfey, P.N., Sozzani, R. Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy. eLife 2016;5:e14770. DOI:
2016Conway, J.M., Pierce, W.S., Le, J.-H., Harper, G.W., Wright, J.H., Tucker, A.L., Zurawski, J.V., Lee, L.L., Blumer-Schuette, S.E., Kelly, R.M. Multidomain, Surface Layer-associated Glycoside Hydrolases Contribute to Plant Polysaccharide Degradation by Caldicellulosiruptor Species J. Biol. Chem. 291, 6732-6747.
2016De Luis Balaguera, M.A., Ramos-Pezzottia, M., Rahhala, M.B., Melvin, C.E., Johannes, E., Horne, T.J., Sozzani, R. Multi-sample Arabidopsis Growth and Imaging Chamber (MAGIC) for long term imaging in the ZEISS Lightsheet Z.1. Developmental Biology, in press.
2016Slattery, R.A., Grennan, A.K., Sivaguru, M., Sozzani, R., Ort, D.R. Light sheet microscopy reveals more gradual light attenuation in light-green versus dark-green soybean leaves. J. Exp. Botany, in press. doi: 10.1093/jxb/erw246
2016Allen, T.A., Gracieux, D., Talib, M., Tokarz, D.A., Hensley, M.T., Cores, J., Vandergriff, A., Tang, J., de Andrade, J.B.M., Dinh, P.-U., Yoder, J.Y., Cheng, K. Angiopellosis as an Alternative Mechanism of Cell Extravasation. Stem Cells, in press.
2015Han S.W., Alonso J.M., Rojas-Pierce M. REGULATOR OF BULB BIOGENESIS1 (RBB1) Is Involved in Vacuole Bulb Formation in Arabidopsis. PLoS ONE 10(4): e0125621. doi:10.1371/journal.pone.0125621
2015Stowe, S.D., Thompson, R.J., Peng, L., Su, Z., Blackledge, M.S., Coe, W.H., Johannes, E., Lapham, V.K., Mackenzie, J., Melander, C., and Cavanagh, J. Membrane-Permeabilizing Activity of Reverse-Amide 2-Aminoimidazole Antibiofilm Agents Against Gram-Negative Pathogen, Acinetobacter baumannii. Current Drug Delivery, 12(2): 223-230.
2014Yu, Z., Gwak, K.S., Treasure, T., Jameel, H., Chang, H.M., Park, S. Effect of Lignin Chemistry on the Enzymatic Hydrolysis of Woody Biomass. ChemSusChem 7, 1942-1950 DOI: 10.1002/cssc.201400042.
2014Zheng J., Han S.W., Rojas-Pierce M. Multiple vacuoles in impaired tonoplast trafficking3 mutants are independent organelles. Plant Signaling and Behavior. 9:10, e972113, doi: 10.4161/psb.29783 e29783.
2014Zheng J , Han S.W. , Rodriguez-Welsh M.F. and Rojas-Pierce M. Homotypic vacuole fusion requires VTI11 and is regulated by phosphoinositides. Molecular Plant. 7:1026-1040.
2014Jiang T., Mo, R., Bellotti A., Zhou J., Gu Z. Gel-Liposome-Mediated Co-Delivery of Anticancer Membrane-Associated Proteins and Small-Molecule Drugs for Enhanced Therapeutic Efficacy. Advanced Functional Materials, 24(2295).
2014Carrell, S.N., Reeves, G.T. Imaging the Dorsal-Ventral Axis of Live and Fixed Drosophila melanogaster Embryos. Methods Mol Biol, 1189: 63-78.
2014Tai W., Mo R., Lu Y., Jiang T., Gu Z. Folding Drug-Pending Segment into Nanocarriers for Co-Delivery of Anticancer Drugs. Biomaterials, 35(7194).
2014Mo R., Jiang T., Gu Z. Enhanced Anticancer Efficacy by ATP-Mediated Liposomal Drug Delivery. Angewandte Chemie International Edition, 53(5810).
2014Selote, D. R. Samira, A. Matthiadis, J. Gillikin and T.A. Long Iron binding E3 ligase mediates iron response in plants by targeting bHLH transcription factors. Plant Physiology 167(1):273-86.
2014Popovici O.A., Mikó I., Seltmann K.C., Deans A.R. The maxillo-labial complex of Sparasion (Hymenoptera, Platygastroidea). Journal of Hymenoptera Research 37, 77-101.
2014Shen W., Dallas M.B., Goshe M.B., Hanley-Bowdoin L.SnRK1 phosphorylation of AL2 delays Cabbage leaf curl virus infection in Arabidopsis.Journal of Virology 88: 10598-612.
2014Hung, C.-Y., Umstead, M.L., Chen, J., Holliday, B.M., Kittur, F.S., Henry, R.J., Kurkey, K.O., Xie, J. Differential expression of a novel gene EaF82a in green and yellow sectors of variegated Epipremnum aureum leaves is related to uneven distribution of auxin. Physiologia Plantarum 152: 749–762.
2014Mo R., Jiang T., DiSanto R., Tai W., Gu Z. ATP-Triggered Anticancer Drug Delivery. Nature Communications, 5(3364).
2013Liu X., Feng C.-H., Franks R., Qu R., Xir, D.-Y., Xiang Q.-Y. Plant regeneration and genetic transformation of C. canadensis: a non-model plant appropriate for investigation of flower development in Cornus(Cornaceae). Plant Cell Reports 32: 77-87.
2013Ernst A, Mikó I, Deans AR. Morphology and function of the ovipositor mechanism in Ceraphronoidea (Hymenoptera: Apocrita). Journal of Hymenoptera Research.
2013Rueschhoff, E. E., Gillikin, J. W., Sederoff, H. W., Daub, M. E. The SOS4 pyridoxal kinase is required for maintenance of vitamin B6 – mediated processes in chloroplasts. Plant Physiol. Biochem. 63:281-291.
2013Mikó, I., L. Masner, E. Johannes, M. J. Yoder, A.R. Deans. Male terminalia of Ceraphronoidea: diversity in an otherwise monotonous taxon. Insect systematics and Evolution.
2012Li Q., Lin Y.-C, Sun Y.H., Song J., Chen H, Zhang X.-H., Sederoff R., Chiang, V. Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa. PNAS 109(36) 14699-14704.
2012Li Q., Lin Y.-C., Sun Y.H., Song J., Chen H., Zhang X.-H., Sederoff R., Chiang, V. Splice variant of the SND1 transcription factor is a dominant negative of SND1 members and their regulation in Populus trichocarpa. PNAS 109(36) 14699-14704.
2012Çakır, E., Khan, S.A., Foegeding, A. The effect of pH on gel structures produced using protein–polysaccharide phase separation and network inversion. International Dairy Journal 27, 99-102.
2012Morioka S., Inagaki M., Komatsu Y., Mishina Y.,Matsumoto K., Ninomiya-Tsuji J. TAK1 kinase signaling regulates embryonic angiogenesis by modulating endothelial cell survival and migration. Blood 120, 3846-3857.
2012Çakır, E.,Vinyard C.J., Essick, G., Daubert, C.R., Drake, M., Foegeding, E. A. Interrelations among physical characteristics, sensory perception and oral processing of protein-based soft-solid structures. Food Hydrocolloids 29, 234-245.
2012Deans AR, Mikó I, Wipfler B, Friedrich F Evolutionary phenomics and the emerging enlightenment of arthropod systematics. Invertebrate Systematics 26: 323–330.
2012Leksrisompong P.N., Lanier T.C., Foegeding E.A. Effects of heating rate and pH on fracture and water-holding properties of globular protein gels as explained by micro-phase separation. J Food Sci 77(2): E60-7.
2012Rivera-Serrano E.E., Rodrigez-Welsh M.F., Hicks G.R., Rojas-Pierce M. A small molecule inhibitor partitions two distinct pathways for trafficking of tonoplast intrinsic proteins in Arabidopsis. PLoS ONE 7(9) e44735.
2011Fulkerson, E. and Estes, P.A. Common motifs shared by conserved enhancers of Drosophila midline glial genes. JEZ Part B 316B, 61-75.
2011McCullen S.D., Gittard S.D., Miller P.R., Pourdeyhimi B., Narayan R.J., Loboa E.G.
Laser ablation imparts controlled micro-scale pores in electrospun scaffolds for tissue engineering applications. Ann Biomed Eng 39(12) 3021-30.
2011Leksrisompong P.N., Foegeding E.A. How micro-phase separation alters the heating rate effects on globular protein gelation. J Food Sci 76:E318–27.
2011Zhang, Y., Wheatley, R., Fulkerson, E., Tapp, A. and Estes P.A. Mastermind Mutations Generate a Unique Constellation of Midline Cells within the Drosophila CNS. PLoS ONE 6: e26197.
2011Çakır, E., Foegeding, A. Combining protein micro-phase separation and protein–polysaccharide segregative phase separation to produce gel structures. Food Hydrocolloids 25, 1538-1546.
2010McCullen, S.D., C.M. Haslauer, and E.G. Loboa Fiber-reinforced scaffolds for tissue engineering and regenerative medicine: use of traditional textile substrates to nanofibrous arrays (2010). J . Mater. Chem. 20, 8776-8788
DOI: 10.1039/C0JM01443E.
2009Yang, X., Berry T.K., Foegeding, E.A. Foams Prepared from Whey Protein Isolate and Egg White Protein: 1. Physical, Microstructural, and Interfacial Properties. Journal of Food Science 74, E259-E268.
2009Mikó I, Deans AR. Masner, a new genus of Ceraphronidae (Hymenoptera, Ceraphronoidea) described using controlled vocabularies. Zookeys 20, 127-153.
2007Im, Y.J., A.J. Davis, I.Y. Perera, E. Johannes, N.S. Allen, W. F. Boss. The N-terminal membrane occupation and recognition nexus domain of Arabidopsis phosphatidylinositol phosphate kinase 1 regulates enzyme activity. J. Biological Chemistry. 282: 5443-5452.
2007Im, Y.J., I.Y. Perera,, I. Brglez, A.J. Davis, J. Stevenson-Paulik, B.Q. Phillippy, E. Johannes, N.S. Allen, W. F. Boss. Increasing plasma membrane phosphatidylinositol (4,5)bisphosphate biosynthesis increases phosphoinositide metabolism. The Plant Cell, 19: 1603-1616.
2006Nusz G., Johannes E., Allen N.S., Hallen H.D. Self-Assembled Monolayer Coating of Biological Probes to avoid Protein Adhesion. Nano BioTechnology 2, 61-65.
2005Moyer-Henry K., Silva I., Macfall J., Johannes E., Allen N., Goldfarb B., Rufty T. Accumulation and localization of aluminum in root tips of loblolly pine seedlings and the associated ectomycorrhiza Pisolithus tinctorius. Plant Cell Environ 28, 111-120
2004Busov V. B., Johannes, E., Whetten, R. W., Sederoff, R. R., Spiker, S. L., Lanz-Garcia, C. & Goldfarb, B. An auxin-inducible gene from loblolly pine (Pinus taeda L.) is differentially expressed in mature and juvenile phase shoots and encodes a putative transmembrane protein, Planta 218, 916-927.
2003Allen N.S., Chattaraj P., Collings D.A. & Johannes E. Gravisensing: ionic responses, cytoskeleton and amyloplast behavior. Advances in Space Research 32, 1631-1637.
2003Weerasinghe, R. R., Collings, D.A., Johannes, E. & Allen, N. S. The distributional changes and role of microtubules in Nod factor challenged Medicago sativa root hairs, Planta 218, 276-287.
2001Johannes E., Collings D.A., Rink J.C. & Allen N.S. Cytoplasmic pH dynamics in maize pulvinal cells induced induced by gravity vector changes. Plant Physiology, 127, 119-130.