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GSL User Publications

At the GSL, we measure ourselves by how our services help researchers at NC State and the greater community to do great science. If our services have contributed to a publication of yours, please let us know and we will add you to our growing list of user publications. Please see here for information on how to cite us in the future.

  • Aoun, M., Carter, A. H., Morris, C. F., & Kiszonas, A. M. (2022). Genetic architecture of end-use quality traits in soft white winter wheat. BMC genomics, 23(1), 1-17.
  • Anta-Fernández, F., Santander-Gordón, D., Becerra, S., Santamaría, R., Díaz-Mínguez, J. M., & Benito, E. P. (2022). Nitric Oxide Metabolism Affects Germination in Botrytis cinerea and Is Connected to Nitrate Assimilation. Journal of Fungi, 8(7), 699.
  • Baltzegar, J. F., & Gould, F. (2022). Development of the First High-Density Linkage Map in the Maize Weevil, Sitophilus zeamais. bioRxiv.
  • Brůna, T., Aryal, R., Dudchenko, O., Sargent, D. J., Mead, D., Buti, M., … & Worthington, M. L. (2022). A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. Hillquist). bioRxiv.
  • Coomber, A., Saville, A., Carbone, I., & Ristaino, J. B. (2022). An open-access T-BAS phylogeny for Emerging Phytophthora species. bioRxiv.
  • Cortes, L. M., Brodsky, D., Chen, C., Pridgen, T., Odle, J., Snider, D. B., … & Käser, T. (2022). Immunologic and pathologic characterization of a novel swine biomedical research model for eosinophilic esophagitis. Frontiers in allergy, 3.
  • Cowger, C., Meyers, E., & Whetten, R. (2022). Sensitivity of the US wheat powdery mildew population to quinone outside inhibitor fungicides and determination of the complete Blumeria graminis f. sp. tritici cytochrome b gene. Phytopathology®, 112(2), 249-260.
  • Crump, W. W., Peace, C., Zhang, Z., & McCord, P. (2022). Fruit cracking and firmness DNA test development and evaluation in sweet cherry. Fruit Research, 2(1), 1-11.
  • D’Arcangelo, K. N., Wallace, E. C., Miles, T. D., & Quesada-Ocampo, L. (2022). Carboxylic acid amide but not quinone outside inhibitor fungicide resistance mutations show clade-specific occurrence in Pseudoperonospora cubensis causing downy mildew in commercial and wild cucurbits. Phytopathology, (ja).
  • Davis, F., Kakacek, B., Doorandish, D., Goldwasser, T., Agboha, N., 2021 UMBC Phage Hunters, … & Erill, I. (2022). Genome Sequences of Streptomyces Bacteriophages Fabian, FlowerPower, Geostin, RetrieverFever, and Vorvolakos. Microbiology Resource Announcements, e00998-22.
  • DeLorenzo, L., DeBrock, V., Baez, A. C., Ciccotto, P. J., Peterson, E. N., Stull, C., … & Powder, K. E. (2022). Genetic architecture of trophic adaptations in cichlid fishes. bioRxiv.
  • DeLorenzo, L., DeBrock, V., Carmona Baez, A., Ciccotto, P. J., Peterson, E. N., Stull, C., … & Powder, K. E. (2022). Morphometric and Genetic Description of Trophic Adaptations in Cichlid Fishes. Biology, 11(8), 1165.
  • García-Rodríguez, R. O. D., & Thiessen, L. D. (2022). Comparative Analysis of the Rhizospheric Bacterial Communities of Flue-Cured Tobacco Affected by Granville Wilt. PhytoFrontiers™, PHYTOFR-02.
  • Guo, R., Papanicolaou, A., & Fritz, M. L. (2022). Validation of reference-assisted assembly using existing and novel Heliothine genomes. Genomics, 114(5), 110441.
  • Luis, J. M., Carbone, I., Mack, B. M., Lebar, M. D., Cary, J. W., Gilbert, M. K., … & Ojiambo, P. S. (2022). Dataset for transcriptomic profiles associated with development of sexual structures in Aspergillus flavus. Data in Brief, 42, 108033.
  • Luis, J. M., Carbone, I., Mack, B. M., Lebar, M. D., Cary, J. W., Gilbert, M. K., … & Ojiambo, P. S. (2022). Development of sexual structures influences metabolomic and transcriptomic profiles in Aspergillus flavus. Fungal Biology, 126(3), 187-200.
  • Madden, A. A., Lahue, C., Gordy, C. L., Little, J. L., Nichols, L. M., Calvert, M. D., … & Smukowski Heil, C. (2022). Sugar‐seeking insects as a source of diverse bread‐making yeasts with enhanced attributes. Yeast, 39(1-2), 108-127.
  • Malacrinò, A., & Bennett, A. E. (2022). Soil microbiota and herbivory influence the structure of plant-associated microbial communities in tomato plants. bioRxiv.
  • Manvell, C., Berman, H., Callahan, B., Breitschwerdt, E., Swain, W., Ferris, K., … & Lashnits, E. (2022). Identification of microbial taxa present in Ctenocephalides felis (cat flea) reveals widespread co-infection and associations with vector phylogeny. Parasites & Vectors, 15(1), 1-17.
  • Medina, J. M., Jmel, M. A., Cuveele, B., Gómez-Martín, C., Aparicio-Puerta, E., Mekki, I., … & Kotsyfakis, M. (2022). Transcriptomic analysis of the tick midgut and salivary gland responses upon repeated blood-feeding on a vertebrate host. Frontiers in cellular and infection microbiology, 1125.
  • Molo, M. S., White, J. B., Cornish, V., Gell, R. M., Baars, O., Singh, R., … & Carbone, I. (2022). Asymmetrical lineage introgression and recombination in populations of Aspergillus flavus: Implications for biological control. Plos one, 17(10), e0276556.
  • Prim, J. H., Phillips, M. C., Lamm, M. S., Brady, J., Cabral, I., Durden, S., … & Godwin, J. (2022). Estrogenic signaling and sociosexual behavior in wild sex‐changing bluehead wrasses, Thalassoma bifasciatum. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, 337(1), 24-34.
  • Reed, E. M., Reiskind, M. H., & Burford Reiskind, M. O. (2022). Life‐history stage and the population genetics of the tiger mosquito Aedes albopictus at a fine spatial scale. Medical and Veterinary Entomology.
  • Riegl, S. D., Starnes, C., Jima, D. D., Baptissart, M., Diehl, A. M., Belcher, S. M., & Cowley, M. (2022). The imprinted gene Zac1 regulates steatosis in developmental cadmium-induced nonalcoholic fatty liver disease. Toxicological Sciences.
  • Rojas-Gómez, M., Jiménez-Madrigal, J. P., Montero-Vargas, M., Loaiza-Montoya, R., Chavarría, M., Meneses, E., & Fuchs, E. J. (2022). A draft genome assembly of “Cas”(Psidium friedrichsthalianum (O. Berg) Nied.): an indigenous crop of Costa Rica untapped. Genetic Resources and Crop Evolution, 69(1), 39-47.
  • Schneider-Crease, I. A., Chiou, K. L., Moya, I. L., Lemma, A., Ayele, F., Haile, A. A., … & Varsani, A. (2022). A novel statovirus identified in fecal samples from wild geladas in the Ethiopian highlands. Archives of virology, 1-5.
  • Shi, R., Jin, J., Nifong, J. M., Shew, D., & Lewis, R. S. (2022). Homoeologous chromosome exchange explains the creation of a QTL affecting soil‐borne pathogen resistance in tobacco. Plant biotechnology journal, 20(1), 47-58.
  • Simmers, M. D., Hudson, K. M., Baptissart, M., & Cowley, M. (2022). Epigenetic control of the imprinted growth regulator Cdkn1c in cadmium-induced placental dysfunction. Epigenetics, 1-17.
  • Simmers, M. D. (2022). Dysregulation of Gene Expression in Cadmium-induced Placental Insufficiency.
  • Smith, W. A., Matsuba, Y., & Dewey, R. E. (2022). Knockout of a key gene of the nicotine biosynthetic pathway severely affects tobacco growth under field, but not greenhouse conditions. BMC research notes, 15(1), 1-6.
  • Stephens, C. M., Gannon, T. W., Cubeta, M. A., Sit, T. L., & Kerns, J. P. (2022). Characterization and Aggressiveness of Take-All Root Rot Pathogens Isolated from Symptomatic Bermudagrass Putting Greens. Phytopathology®, 112(4), 811-819.
  • Tandonnet, S., Krsticevic, F., Basika, T., Papathanos, P. A., Torres, T. T., & Scott, M. J. (2022). A chromosomal-scale reference genome of the New World Screwworm, Cochliomyia hominivorax. DNA Research.
  • Tisdale, R. H., Zhang, K., Zentella, R., Burkey, K., & Liao, H. L. The Dynamics of Microbial and Nutrient Networks Throughout the Development of Ozone-Resilient Soybean Cultivar’Jake’. Available at SSRN 4025877.
  • Van den Broeck, L., Schwartz, M. F., Krishnamoorthy, S., Tahir, M. A., Spurney, R. J., Madison, I., … & Sozzani, R. (2022). Establishing a reproducible approach to study cellular functions of plant cells with 3D bioprinting. Science advances, 8(41), eabp9906.
  • Verrett, T. B., Webala, P. W., Patterson, B. D., & Dick, C. W. (2022). Remarkably low host specificity in the bat fly Penicillidia fulvida (Diptera: Nycteribiidae) as assessed by mitochondrial COI and nuclear 28S sequence data. Parasites & Vectors, 15(1), 1-16.
  • Watson, A. T., Carmona Baez, A., Jima, D., Reif, D., Ding, J., Roberts, R., & Kullman, S. W. (2022). TCDD alters essential transcriptional regulators of osteogenic differentiation in multipotent mesenchymal stem cells. Toxicological Sciences.
  • Winkler, I. S., Kirk-Spriggs, A. H., Bayless, K. M., Soghigian, J., Meier, R., Pape, T., … & Wiegmann, B. M. (2022). Phylogenetic resolution of the fly superfamily Ephydroidea–Molecular systematics of the enigmatic and diverse relatives of Drosophilidae. Plos one, 17(10), e0274292.
  • Winkler, A., Pivonka, A., Conry-Murray, A., Petruconis, C., Patterne, I., Bergman, B., … & Lee-Soety, J. Y. (2022). Genome Sequences and Characteristics of Six Cluster B1 Mycobacteriophages Discovered at Saint Joseph’s University. Microbiology Resource Announcements, 11(10), e00754-22.
  • Yang, H., Nukunya, K., Ding, Q., & Thompson, B. E. (2022). Tissue-specific transcriptomics reveal functional differences in floral development. Plant Physiology, 188(2), 1158-1173.

  • Adhikari, T. B., Aryal, R., Redpath, L. R., Van den Broeck, L., Ashrafi, H., Philbrick, A., … & Louws, F. (2021). RNA-Seq and Gene Regulatory Network Analyses Uncover Candidate Genes in the Early Defense to Two Hemibiotrophic Colletorichum spp. in Strawberry. Frontiers in genetics, 2889.
  • Adhikari, T. B., Muzhinji, N., Halterman, D., & Louws, F. J. (2021). Genetic diversity and population structure of Alternaria species from tomato and potato in North Carolina and Wisconsin. Scientific reports, 11(1), 1-19.
  • Allwood, J. S., Meredith, E., Lindquist, C., & Breen, M. (2021). Application of an established canine genotyping method to a sequence-based approach. Forensic Science International: Animals and Environments, 1, 100029.
  • Aoun, M., Carter, A. H., Ward, B. P., & Morris, C. F. (2021). Genome-wide association mapping of the ‘super-soft’ kernel texture in white winter wheat. Theoretical and Applied Genetics, 134(8), 2547-2559.
  • Baltzegar, J., Vella, M., Gunning, C., Vasquez, G., Astete, H., Stell, F., … & Gould, F. (2021). Rapid evolution of knockdown resistance haplotypes in response to pyrethroid selection in Aedes aegypti. Evolutionary applications, 14(8), 2098.
  • Cheng, Q., & Call, D. F. (2021). Developing microbial communities containing a high abundance of exoelectrogenic microorganisms using activated carbon granules. Science of The Total Environment, 768, 144361.
  • Clark, N. M., Nolan, T. M., Wang, P., Song, G., Montes, C., Valentine, C. T., … & Walley, J. W. (2021). Integrated omics networks reveal the temporal signaling events of brassinosteroid response in Arabidopsis. Nature communications, 12(1), 1-13.
  • Cross, K. L., Leigh, B. A., Hatmaker, E. A., Mikaelyan, A., Miller, A. K., & Bordenstein, S. R. (2021). Genomes of gut bacteria from Nasonia wasps shed light on phylosymbiosis and microbe-assisted hybrid breakdown. Msystems, 6(2), e01342-20.
  • Daley, J., & Wehner, T. C. (2021). Screening for bacterial fruit blotch resistance in watermelon fruit. Crop Science, 61(2), 1228-1240.
  • Davis, R. J., Belikoff, E. J., Dickey, A. N., Scholl, E. H., Benoit, J. B., & Scott, M. J. (2021). Genome and transcriptome sequencing of the green bottle fly, Lucilia sericata, reveals underlying factors of sheep flystrike and maggot debridement therapy. Genomics, 113(6), 3978-3988.
  • DeLorenzo, Leah, Destiny Mathews, A. Allyson Brandon, Mansi Joglekar, Aldo Carmona Baez, Emily C. Moore, Patrick J. Ciccotto, Natalie B. Roberts, Reade B. Roberts, and Kara E. Powder. “Genetic basis of body shape variation along the benthic-pelagic axis in cichlid fishes.” bioRxiv (2021).
  • Echeverría-Beirute, F., Varela-Benavides, I., P Jiménez-Madrigal, J., Carvajal-Chacon, M., & Guzmán-Hernández, T. (2021). eDNA extraction protocol for metagenomic studies in tropical soils. BioTechniques, 71(6), 580-586.
  • Farrow III, J. M., Pesci, E. C., & Slade, D. J. (2021). Genome sequences for two Acinetobacter baumannii strains obtained using the Unicycler Hybrid Assembly Pipeline. Microbiology Resource Announcements, 10(10), e00017-21.
  • Grzywacz, A., Trzeciak, P., Wiegmann, B. M., Cassel, B. K., Pape, T., Walczak, K., … & Piwczyński, M. (2021). Towards a new classification of Muscidae (Diptera): a comparison of hypotheses based on multiple molecular phylogenetic approaches. Systematic Entomology, 46(3), 508-525.
  • Gu, M., Bui, H. X., Desaeger, J. A., & Ye, W. (2021). First Report of Meloidogyne enterolobii on Thai Basil in Florida, United States. Plant Disease, 105(11), 3764.
  • Han, J., & Rotenberg, D. (2021). Integration of transcriptomics and network analysis reveals co-expressed genes in Frankliniella occidentalis larval guts that respond to tomato spotted wilt virus infection. BMC genomics, 22(1), 1-17.
  • Holmes, J. C., Scholl, E. H., Dickey, A. N., & Hess, P. R. (2021). High-resolution characterization of the structural features and genetic variation of six feline leukocyte antigen class I loci via single molecule, real-time (SMRT) sequencing. Immunogenetics, 73(5), 381-393.
  • Hudson, K. M., Shiver, E., Yu, J., Mehta, S., Jima, D. D., Kane, M. A., … & Cowley, M. (2021). Transcriptomic, proteomic, and metabolomic analyses identify candidate pathways linking maternal cadmium exposure to altered neurodevelopment and behavior. Scientific reports, 11(1), 1-18.
  • Hudson, K. M., Shiver, E., Yu, J., Mehta, S., Jima, D. D., Kane, M. A., … & Cowley, M. (2021). Transcriptomic, proteomic, and metabolomic analyses identify candidate pathways linking maternal cadmium exposure to altered neurodevelopment and behavior. Scientific reports, 11(1), 1-18.
  • Jackson, C. E., Xu, S., Ye, Z., Pfrender, M. E., Lynch, M., Colbourne, J. K., & Shaw, J. R. (2021). Chromosomal rearrangements preserve adaptive divergence in ecological speciation. BioRxiv.
  • Kofsky, J., Zhang, H., & Song, B. H. (2021). Novel resistance strategies to soybean cyst nematode (SCN) in wild soybean. Scientific reports, 11(1), 1-13.
  • Land, E. S., Cridland, C. A., Craige, B., Dye, A., Hildreth, S. B., Helm, R. F., … & Perera, I. Y. (2021). A role for inositol pyrophosphates in the metabolic adaptations to low phosphate in arabidopsis. Metabolites, 11(9), 601.
  • Landstoy T. M.A., Reynolds, R.G. & Henderson, R.W. (2021). A small new arboreal species of west Indian boa (Boidae; Chilabothrus) from Southern Hispaniola. Breviora, 571, 1 – 20.
  • Lee, M. R., & Hawkes, C. V. (2021). Plant and soil drivers of whole-plant microbiomes: variation in switchgrass fungi from coastal to mountain sites. Phytobiomes Journal, 5(1), 69-79.
  • Lee, M. R., & Hawkes, C. V. (2021). Widespread co‐occurrence of Sebacinales and arbuscular mycorrhizal fungi in switchgrass roots and soils has limited dependence on soil carbon or nutrients. Plants, People, Planet, 3(5), 614-626.
  • Maren, N., Zhao, F., Aryal, R., Touchell, D., Liu, W., Ranney, T., & Ashrafi, H. (2021). Reproductive developmental transcriptome analysis of Tripidium ravennae (Poaceae). BMC genomics, 22(1), 1-20.
  • Merrick, L. F., Burke, A. B., Chen, X., & Carter, A. H. (2021). Breeding with major and minor genes: Genomic selection for quantitative disease resistance. Frontiers in plant science, 1599.
  • Merrick, L. F., Burke, A. B., Zhang, Z., & Carter, A. H. (2021). Comparison of Single-Trait and Multi-Trait Genome-Wide Association Models and Inclusion of Correlated Traits in the Dissection of the Genetic Architecture of a Complex Trait in a Breeding Program. Frontiers in plant science, 3416.
  • Milone, J. P., & Tarpy, D. R. (2021). Effects of developmental exposure to pesticides in wax and pollen on honey bee (Apis mellifera) queen reproductive phenotypes. Scientific reports, 11(1), 1-12.
  • Oloka, B. M., da Silva Pereira, G., Amankwaah, V. A., Mollinari, M., Pecota, K. V., Yada, B., … & Craig Yencho, G. (2021). Discovery of a major QTL for root-knot nematode (Meloidogyne incognita) resistance in cultivated sweetpotato (Ipomoea batatas). Theoretical and Applied Genetics, 134(7), 1945-1955.
  • Noreuil, A., & Fritz, M. L. (2021). Differential gene expression in the heads of behaviorally divergent Culex pipiens mosquitoes. Insects, 12(3), 271.
  • Patel, R., Chen, J., Xu, J., Erdmann, E., Laughlin, Z., & Alvey, R. M. (2021). Complete Genome Sequence of the Anabaena Myophage Elbi. Microbiology Resource Announcements, 10(29), e00552-21.
  • Rahman, A., Standish, J. R., D’arcangelo, K. N., & Quesada-Ocampo, L. M. (2021). Clade-specific biosurveillance of Pseudoperonospora cubensis using spore traps for precision disease management of cucurbit downy mildew. Phytopathology®, 111(2), 312-320.
  • Reynolds, R. G., Miller, A. H., Ríos-Franceschi, A., Huffine, C. A., Fredette, J., Angeli, N. F., … & Puente-Rolón, A. R. (2021). Molecular phylogeny of Puerto Rico Bank dwarf geckos (Squamata: Sphaerodactylidae: Sphaerodactylus). bioRxiv.
  • Rusert, L. M., Pettis, J. S., & Tarpy, D. R. (2021). Introduction of Varroa destructor has not altered honey bee queen mating success in the Hawaiian archipelago. Scientific Reports, 11(1), 1-8.
  • Saville, A. C., La Spada, F., Faedda, R., Migheli, Q., Scanu, B., Ermacora, P., … & Ristaino, J. B. (2021). Population structure of Phytophthora infestans collected on potato and tomato in Italy. Plant Pathology, 70(9), 2165-2178.
  • Saville, A. C., & Ristaino, J. B. (2021). Global historic pandemics caused by the FAM-1 genotype of Phytophthora infestans on six continents. Scientific reports, 11(1), 1-11.
  • Sheppard, J., Land, E. S., Toennisson, T. A., Doherty, C. J., & Perera, I. Y. (2021). Uncovering transcriptional responses to fractional gravity in Arabidopsis roots. Life, 11(10), 1010.
  • Stewart, A. S., Schaaf, C. R., Luff, J. A., Freund, J. M., Becker, T. C., Tufts, S. R., … & Gonzalez, L. M. (2021). HOPX+ injury-resistant intestinal stem cells drive epithelial recovery after severe intestinal ischemia. American Journal of Physiology-Gastrointestinal and Liver Physiology, 321(5), G588-G602.
  • Sweany, R. R., Mack, B. M., Moore, G. G., Gilbert, M. K., Cary, J. W., Lebar, M. D., … & Damann, K. E. (2021). Genetic responses and aflatoxin inhibition during co-culture of aflatoxigenic and non-aflatoxigenic Aspergillus flavus. Toxins, 13(11), 794.
  • Thomas, S. K., Liu, X., Du, Z. Y., Dong, Y., Cummings, A., Pokorny, L., … & Leebens‐Mack, J. H. (2021). Comprehending Cornales: phylogenetic reconstruction of the order using the Angiosperms353 probe set. American Journal of Botany, 108(7), 1112-1121.
  • Thompson, Y. A., Carter, A. H., Ward, B. P., Kiszonas, A. M., & Morris, C. F. (2021). Association mapping of sponge cake volume in US Pacific Northwest elite soft white wheat (Triticum aestivum L.). Journal of Cereal Science, 100, 103250.
  • Westerman, T. L., McClelland, M., & Elfenbein, J. R. (2021). YeiE regulates motility and gut colonization in Salmonella enterica serotype Typhimurium. Mbio, 12(3), e03680-20.
  • Wyatt, B. H., Amin, N. M., Bagley, K., Wcisel, D. J., Dush, M. K., Yoder, J. A., & Nascone-Yoder, N. M. (2021). Single-minded 2 is required for left-right asymmetric stomach morphogenesis. Development, 148(17), dev199265.
  • Yang, H., Nukunya, K., Ding, Q., & Thompson, B. E. (2021). Tissue-specific transcriptomics reveal functional differences in maize floral development. bioRxiv.
  • Ye, W., Koenning, S. R., Zeng, Y., Zhuo, K., & Liao, J. (2021). Molecular characterization of an emerging root-knot nematode Meloidogyne enterolobii in North Carolina, USA. Plant Disease, 105(4), 819-831.
  • Yow, A. G., Zhang, Y., Bansal, K., Eacker, S. M., Sullivan, S., Liachko, I., … & Ashrafi, H. (2021). Genome sequence of Monilinia vaccinii-corymbosi sheds light on mummy berry disease infection of blueberry and mating type. G3, 11(2), jkaa052.
  • Aardema, M. L., Vonholdt, B. M., Fritz, M. L., & Davis, S. R. (2020). Global evaluation of taxonomic relationships and admixture within the Culex pipiens complex of mosquitoes. Parasites & vectors, 13(1), 1-17.
  • Adhikari, T. B., Gao, A., Ingram, T., & Louws, F. J. (2020). Pathogenomics Characterization of an Emerging Fungal Pathogen, Fusarium oxysporum f. sp. lycopersici in Greenhouse Tomato Production Systems. Frontiers in microbiology, 11, 1995.
  • Adhikari, Tika B., Thomas Ingram, Dennis Halterman, and Frank J. Louws. “Gene genealogies reveal high nucleotide diversity and admixture haplotypes within three Alternaria species associated with tomato and potato.” Phytopathology 110, no. 8 (2020): 1449-1464.
  • Alston, M. A., Lee, J., Moore, M. E., Kingsolver, J. G., & Willett, C. S. (2020). The ghost of temperature past: interactive effects of previous and current thermal conditions on gene expression in Manduca sexta. Journal of Experimental Biology, 223(7), jeb213975.
  • Aungst, E. R., Puente‐Rolón, A. R., & Reynolds, R. G. (2020). Genetic diversity in the US ex situ populations of the endangered Puerto Rican Boa, Chilabothrus inornatus. Zoo biology, 39(3), 205-213.
  • Azadani, D. N., Zhang, D., Hatherill, J. R., Silva, D., & Turner, J. W. (2020). Isolation, characterization, and comparative genomic analysis of a phage infecting high-level aminoglycoside-resistant (HLAR) Enterococcus faecalis. PeerJ, 8, e9171.
  • Buenaventura, E., Szpila, K., Cassel, B. K., Wiegmann, B. M., & Pape, T. (2020). Anchored hybrid enrichment challenges the traditional classification of flesh flies (Diptera: Sarcophagidae). Systematic Entomology, 45(2), 281-301.
  • Clark, N. M., Fisher, A. P., Berckmans, B., Van den Broeck, L., Nelson, E. C., Nguyen, T. T., … & Sozzani, R. (2020). Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division. Proceedings of the National Academy of Sciences, 117(26), 15332-15342.
  • Chou, H., Jima, D. D., Funk, D. H., Jackson, J. K., Sweeney, B. W., & Buchwalter, D. B. (2020). Transcriptomic and life history responses of the mayfly Neocloeon triangulifer to chronic diel thermal challenge. Scientific reports, 10(1), 1-11.
  • Crook, A. D., Willoughby, A. C., Hazak, O., Okuda, S., VanDerMolen, K. R., Soyars, C. L., … & Nimchuk, Z. L. (2020). BAM1/2 receptor kinase signaling drives CLE peptide-mediated formative cell divisions in Arabidopsis roots. Proceedings of the National Academy of Sciences, 117(51), 32750-32756.
  • Du, Z. Y., Harris, A. J., & Xiang, Q. Y. J. (2020). Phylogenomics, co-evolution of ecological niche and morphology, and historical biogeography of buckeyes, horsechestnuts, and their relatives (Hippocastaneae, Sapindaceae) and the value of RAD-Seq for deep evolutionary inferences back to the Late Cretaceous. Molecular phylogenetics and evolution, 145, 106726.
  • Ernst, D. A., Fitak, R. R., Schmidt, M., Derby, C. D., Johnsen, S., & Lohmann, K. J. (2020). Pulse magnetization elicits differential gene expression in the central nervous system of the Caribbean spiny lobster, Panulirus argus. Journal of Comparative Physiology A, 206(5), 725-742.
  • Ernst, A., & Thiessen, L. (2020). Cercospora nicotianae Isolates from Flue-Cured Tobacco in North Carolina Found with G143A and F129L Mutations in Cytochrome b Gene. Plant Health Progress, 21(4), 288-290.
  • Farrow III, J. M., Wells, G., Palethorpe, S., Adams, M. D., & Pesci, E. C. (2020). CsrA supports both environmental persistence and host-associated growth of Acinetobacter baumannii. Infection and Immunity, 88(12), e00259-20.
  • Freitas, E. S., Miller, A. H., Reynolds, R. G., & Siler, C. D. (2020). A taxonomic conundrum: Characterizing a cryptic radiation of Asian gracile skinks (Squamata: Scincidae: Riopa) in Myanmar. Molecular phylogenetics and evolution, 146, 106754.
  • Fritz, Megan L., et al. “Mutations in a novel cadherin gene associated with Bt resistance in Helicoverpa zea.” G3: Genes, Genomes, Genetics 10.5 (2020): 1563-1574.
  • Gell, R. M., Horn, B. W., & Carbone, I. (2020). Genetic map and heritability of Aspergillus flavus. Fungal Genetics and Biology, 144, 103478.
  • b Gene, C. (2020). Cercospora nicotianae Isolates from Flue-Cured Tobacco in North Carolina Found with G143A and F129L Mutations in. Peer-Reviewed Journal of Applied Plant Health, 21(4), 288-290.
  • Goller, C. C., & Ott, L. E. (2020). Evolution of an 8‐week upper‐division metagenomics course: Diagramming a learning path from observational to quantitative microbiome analysis. Biochemistry and Molecular Biology Education, 48(4), 391-403.
  • Hoyer, J. S., Fondong, V. N., Dallas, M. M., Aimone, C. D., Deppong, D. O., Duffy, S., & Hanley-Bowdoin, L. (2020). Deeply sequenced infectious clones of key cassava begomovirus isolates from Cameroon. Microbiology Resource Announcements, 9(46), e00802-20.
  • Jacobs, R. L., Adhikari, T. B., Pattison, J., Yencho, G. C., Fernandez, G. E., & Louws, F. J. (2020). Assessing rate-reducing foliar resistance to anthracnose crown rot and fruit rot in strawberry. Plant disease, 104(2), 398-407.
  • Johnson, K. M., & Kelly, M. W. (2020). Population epigenetic divergence exceeds genetic divergence in the Eastern oyster Crassostrea virginica in the Northern Gulf of Mexico. Evolutionary Applications, 13(5), 945-959.
  • Jordan, K. W., He, F., de Soto, M. F., Akhunova, A., & Akhunov, E. (2020). Differential chromatin accessibility landscape reveals structural and functional features of the allopolyploid wheat chromosomes. Genome biology, 21(1), 1-30.
  • Kakumanu, M. L., DeVries, Z. C., Barbarin, A. M., Santangelo, R. G., & Schal, C. (2020). Bed bugs shape the indoor microbial community composition of infested homes. Science of the Total Environment, 743, 140704.
  • Kim, S. B., Karre, S., Wu, Q., Park, M., Meyers, E., Claeys, H., … & Balint‐Kurti, P. (2020). Multiple insertions of COIN, a novel maize Foldback transposable element, in the Conring gene cause a spontaneous progressive cell death phenotype. The Plant Journal, 104(3), 581-595.
  • Li-Byarlay, H., Boncristiani, H., Howell, G., Herman, J., Clark, L., Strand, M. K., … & Rueppell, O. (2020). Transcriptomic and epigenomic dynamics of honey bees in response to lethal viral infection. Frontiers in genetics, 11, 566320.
  • Lindqvist‐Kreuze, H., Gamboa, S., Izarra, M., Pérez, W., Correa, M. Y., Astete, A., … & Gonzáles, P. (2020). Population structure and host range of the potato late blight pathogen Phytophthora infestans in Peru spanning two decades. Plant Pathology, 69(2), 334-346.
  • Lipman, R. M., Freise, A. C., Kapinos, A., Torres, C., Reddi, K., & Parker, J. M. (2020). Complete Genome Sequences of Nine Cluster A Mycobacteriophages: AgentM, Ajay, Aragog, Archetta, ForGetIt, Koko, Ph8s, Phlorence, and Wilkins. bioRxiv.
  • Mgonja, D. M., Temu, G. E., Ndunguru, J. C., Mziray, M. F., Lyantagaye, S. L., & Luambano, N. D. (2020). Molecular approach to confirm traditional identification of sampled in Tanzania. Journal of Nematology.
  • Miller, N. F., Standish, J. R., & Quesada-Ocampo, L. M. (2020). Sensitivity of Fusarium oxysporum f. sp. niveum to prothioconazole and pydiflumetofen in vitro and efficacy for Fusarium wilt management in watermelon. Plant Health Progress, 21(1), 13-18.
  • Murphree, C., Kim, S. B., Karre, S., Samira, R., & Balint‐Kurti, P. (2020). Use of virus‐induced gene silencing to characterize genes involved in modulating hypersensitive cell death in maize. Molecular plant pathology, 21(12), 1662-1676.
  • Musungu, B., Bhatnagar, D., Quiniou, S., Brown, R. L., Payne, G. A., O’Brian, G., … & Geisler, M. (2020). Use of dual RNA-seq for systems biology analysis of Zea mays and Aspergillus flavus interaction. Frontiers in microbiology, 11, 853.
  • Oliveira, F., Giorgobiani, E., Guimarães-Costa, A. B., Abdeladhim, M., Oristian, J., Tskhvaradze, L., … & Kamhawi, S. (2020). Immunity to vector saliva is compromised by short sand fly seasons in endemic regions with temperate climates. Scientific reports, 10(1), 1-12.
  • Pais, A. L., Whetten, R. W., & Xiang, Q. Y. (2020). Population structure, landscape genomics, and genetic signatures of adaptation to exotic disease pressure in Cornus florida L.—Insights from GWAS and GBS data. Journal of Systematics and Evolution, 58(5), 546-570.
  • Purayannur, S., Cano, L. M., Bowman, M. J., Childs, K. L., Gent, D. H., & Quesada-Ocampo, L. M. (2020). The effector repertoire of the hop downy mildew pathogen Pseudoperonospora humuli. Frontiers in genetics, 11, 910.
  • Rentsch, J. D., Hardee, L. J., Shelley, C. E., & Williams, M. T. (2020). The Complete Plastid Genome of Neottia bifolia (Raf.) Baumbach (Orchidaceae): Insights Into Chlorophyllous and Achlorophyllous Plastid Genomes. Castanea, 85(2), 285-295.
  • Riley, N. G., Goller, C. C., Leggett, Z. H., Lewis, D. M., Ciccone, K., & Dunn, R. R. (2020). Catalyzing rapid discovery of gold-precipitating bacterial lineages with university students. PeerJ, 8, e8925.
  • Rock, K. D., St Armour, G., Horman, B., Phillips, A., Ruis, M., Stewart, A. K., … & Patisaul, H. B. (2020). Effects of prenatal exposure to a mixture of organophosphate flame retardants on placental gene expression and serotonergic innervation in the fetal rat brain. Toxicological Sciences, 176(1), 203-223.
  • Salger, S. A., Reza, J., Deck, C. A., Wahab, M. A., Baltzegar, D. A., Murr, A. T., & Borski, R. J. (2020). Enhanced biodiversity of gut flora and feed efficiency in pond cultured tilapia under reduced frequency feeding strategies. PloS one, 15(7), e0236100.
  • Saville, A. C., & Ristaino, J. B. (2020). Global historic pandemics caused by the FAM-1 genotype of the Irish potato pathogen Phytophthora infestans. bioRxiv.
  • Seale, A. P., Malintha, G. H. T., Celino‐Brady, F. T., Head, T., Belcaid, M., Yamaguchi, Y., … & Breves, J. P. (2020). Transcriptional regulation of prolactin in a euryhaline teleost: Characterisation of gene promoters through in silico and transcriptome analyses. Journal of neuroendocrinology, 32(11), e12905.
  • Schappe, T., Ritchie, D. F., & Thiessen, L. D. (2020). First report of Serratia marcescens causing a leaf spot disease on industrial hemp (Cannabis sativa). Plant disease, 104(4), 1248.
  • Shi, R., & Panthee, D. R. (2020). Transcriptome-based analysis of tomato genotypes resistant to bacterial spot (Xanthomonas perforans) race t4. International journal of molecular sciences, 21(11), 4070.
  • Standish, J. R., Sharpe, S., Butler, S., Quesada-Ocampo, L. M., & Meadows, I. (2020). First Report of Downy Mildew, Caused by Peronospora effusa, on Spinach (Spinacia oleracea) in North Carolina.
  • Thiessen, L. D., Schappe, T., Cochran, S., Hicks, K., & Post, A. R. (2020). Surveying for potential diseases and abiotic disorders of industrial hemp (Cannabis sativa) production. Plant Health Progress, 21(4), 321-332.
  • Tirloni, L., Lu, S., Calvo, E., Sabadin, G., Di Maggio, L. S., Suzuki, M., … & Ribeiro, J. M. (2020). Integrated analysis of sialotranscriptome and sialoproteome of the brown dog tick Rhipicephalus sanguineus (sl): Insights into gene expression during blood feeding. Journal of proteomics, 229, 103899.
  • Vernal, S., Oliveira, F., Oliveira, W. H., Goulart, T. M., Oristian, J., Calvo, E., … & Ribeiro, J. (2020). RNA-sequencing of the Nyssomyia neivai sialome: a sand fly-vector from a Brazilian endemic area for tegumentary leishmaniasis and pemphigus foliaceus. Scientific Reports, 10(1), 1-18.
  • Wagner, M. R., Busby, P. E., & Balint‐Kurti, P. (2020). Analysis of leaf microbiome composition of near‐isogenic maize lines differing in broad‐spectrum disease resistance. New Phytologist, 225(5), 2152-2165.
  • Wagner, M. R., Roberts, J. H., Balint-Kurti, P. J., & Holland, J. B. (2020). Microbiome composition differs in hybrid and inbred maize. bioRxiv.
  • Wagner, M. R., Roberts, J. H., Balint‐Kurti, P., & Holland, J. B. (2020). Heterosis of leaf and rhizosphere microbiomes in field‐grown maize. New Phytologist, 228(3), 1055-1069.
  • Wang, M., Eyre, A. W., Thon, M. R., Oh, Y., & Dean, R. A. (2020). Dynamic changes in the microbiome of rice during shoot and root growth derived from seeds. Frontiers in microbiology, 2183.
  • Wang, L., Hossen, E. H., Aziz, T. N., Ducoste, J. J., & Francis III, L. (2020). Increased loading stress leads to convergence of microbial communities and high methane yields in adapted anaerobic co-digesters. Water Research, 169, 115155.
  • Yu, X., Mulkey, S. E., Zuleta, M. C., Arellano, C., Ma, B., & Milla-Lewis, S. R. (2020). Quantitative trait loci associated with gray leaf spot resistance in St. Augustine grass. Plant Disease, 104(11), 2799-2806.
  • Zambrano, M. C., Pawlak, J. J., Daystar, J., Ankeny, M., Goller, C. C., & Venditti, R. A. (2020). Aerobic biodegradation in freshwater and marine environments of textile microfibers generated in clothes laundering: Effects of cellulose and polyester-based microfibers on the microbiome. Marine Pollution Bulletin, 151, 110826.
  • Adedipe, F., Grubbs, N., Coates, B., Wiegmman, B., & Lorenzen, M. (2019). Structural and functional insights into the Diabrotica virgifera virgifera ATP-binding cassette transporter gene family. BMC genomics, 20(1), 1-15.
  • Adhikari, P., Adhikari, T. B., Timilsina, S., Meadows, I., Jones, J. B., Panthee, D. R., & Louws, F. J. (2019). Phenotypic and genetic diversity of Xanthomonas perforans populations from tomato in North Carolina. Phytopathology, 109(9), 1533-1543.
  • Adhikari, T. B., Chacon, J. G., Fernandez, G. E., & Louws, F. J. (2019). First report of anthracnose causing both crown and fruit rot of strawberry by Colletotrichum siamense in North Carolina. Plant Disease, 103(7), 1775-1775.
  • Araujo, R. N., Silva, N., Mendes-Sousa, A., Paim, R., Costa, G. C., Dias, L. R., … & Oliveira, F. (2019). RNA-seq analysis of the salivary glands and midgut of the Argasid tick Ornithodoros rostratus. Scientific reports, 9(1), 1-13.
  • Bourret, T. J., Boyle, W. K., Zalud, A. K., Valenzuela, J. G., Oliveira, F., & Lopez, J. E. (2019). The relapsing fever spirochete Borrelia turicatae persists in the highly oxidative environment of its soft‐bodied tick vector. Cellular microbiology, 21(2), e12987.
  • Chang, P. K., Scharfenstein, L. L., Mack, B., & Hua, S. S. T. (2019). Genome sequence of an Aspergillus flavus CA14 strain that is widely used in gene function studies. Microbiology Resource Announcements, 8(33), e00837-19.
  • Clark, N. M., Buckner, E., Fisher, A. P., Nelson, E. C., Nguyen, T. T., Simmons, A. R., … & Sozzani, R. (2019). Stem-cell-ubiquitous genes spatiotemporally coordinate division through regulation of stem-cell-specific gene networks. Nature communications, 10(1), 1-11.
  • Cullen, M., Jacob, M. E., Cornish, V., VanderSchel, I. Q., Cotter, H. V. T., Cubeta, M. A., … & Gilger, B. C. (2019). Multi-locus DNA sequence analysis, antifungal agent susceptibility, and fungal keratitis outcome in horses from Southeastern United States. Plos one, 14(3), e0214214.
  • Cupo, K. L., & Beckstead, R. B. (2019). PCR detection of Heterakis gallinarum in environmental samples. Veterinary parasitology, 271, 1-6.
  • DeVries, Z. C., Santangelo, R. G., Crissman, J., Suazo, A., Kakumanu, M. L., & Schal, C. (2019). Pervasive resistance to pyrethroids in German cockroaches (Blattodea: Ectobiidae) related to lack of efficacy of total release foggers. Journal of Economic Entomology, 112(5), 2295-2301.
  • Eyre, A. W., Wang, M., Oh, Y., & Dean, R. A. (2019). Identification and characterization of the core rice seed microbiome. Phytobiomes Journal, 3(2), 148-157.
  • Faber-Hammond, J. J., Coyle, K. P., Bacheller, S. K., Roberts, C. G., Mellies, J. L., Roberts, R. B., & Renn, S. C. (2019). The intestinal environment as an evolutionary adaptation to mouthbrooding in the Astatotilapia burtoni cichlid. FEMS microbiology ecology, 95(3), fiz016.
  • Gonzalez, L. M., Stewart, A. S., Freund, J., Kucera, C. R., Dekaney, C. M., Magness, S. T., & Blikslager, A. T. (2019). Preservation of reserve intestinal epithelial stem cells following severe ischemic injury. American Journal of Physiology-Gastrointestinal and Liver Physiology, 316(4), G482-G494.
  • Gonzalez, L. M., Stewart, A. S., Freund, J., Kucera, C. R., Dekaney, C. M., Magness, S. T., & Blikslager, A. T. (2019). The Engineered Gut: Use of Stem Cells and Tissue Engineering to Study Physiological Mechanisms and Disease Processes: Preservation of reserve intestinal epithelial stem cells following severe ischemic injury. American Journal of Physiology-Gastrointestinal and Liver Physiology, 316(4), G482.
  • Hicks, J. A., & Liu, H. C. (2019). Impact of HVT vaccination on splenic miRNA expression in Marek’s disease virus infections. Genes, 10(2), 115.
  • Hicks, J. A., Trakooljul, N., & Liu, H. C. (2019). Alterations in cellular and viral microRNA and cellular gene expression in Marek’s disease virus-transformed T-cell lines treated with sodium butyrate. Poultry science, 98(2), 642-652.
  • Hudson, K. M., Belcher, S. M., & Cowley, M. (2019). Maternal cadmium exposure in the mouse leads to increased heart weight at birth and programs susceptibility to hypertension in adulthood. Scientific reports, 9(1), 1-13.
  • Hung, C. S., Barlow, D. E., Varaljay, V. A., Drake, C. A., Crouch, A. L., Russell Jr, J. N., … & Biffinger, J. C. (2019). The biodegradation of polyester and polyester polyurethane coatings using Papiliotrema laurentii. International Biodeterioration & Biodegradation, 139, 34-43.
  • Khanal, P., Sanglard, L. P., Mayberry, K., Sommer, J., Poore, M. H., Poole, D. H., & Serão, N. V. (2019). Identification of differentially expressed genes for fescue toxicosis in high and low tolerant Angus cows.
  • Kruse, E. B., Esvelt Klos, K. L., Marshall, J. M., Murray, T. D., Ward, B. P., & Carter, A. H. (2019). Evaluating selection of a quantitative trait: snow mold tolerance in winter wheat. Agrosystems, Geosciences & Environment, 2(1), 1-8.
  • Lewis, M. H., Carbone, I., Luis, J. M., Payne, G. A., Bowen, K. L., Hagan, A. K., … & Ojiambo, P. S. (2019). Biocontrol strains differentially shift the genetic structure of indigenous soil populations of Aspergillus flavus. Frontiers in microbiology, 10, 1738.
  • Lucas, J. M., Madden, A. A., Penick, C. A., Epps, M. J., Marting, P. R., Stevens, J. L., … & Meineke, E. K. (2019). Azteca ants maintain unique microbiomes across functionally distinct nest chambers. Proceedings of the Royal Society B, 286(1908), 20191026.
  • Noar, R. D., Thomas, E., & Daub, M. E. (2019). A novel polyketide synthase gene cluster in the plant pathogenic fungus Pseudocercospora fijiensis. Plos one, 14(2), e0212229.
  • Ortiz-Medina, J. F., & Call, D. F. (2019). Electrochemical and microbiological characterization of bioanode communities exhibiting variable levels of startup activity. Frontiers in Energy Research, 7, 103.
  • Ortiz-Medina, J. F., Grunden, A. M., Hyman, M. R., & Call, D. F. (2019). Nitrogen gas fixation and conversion to ammonium using microbial electrolysis cells. ACS Sustainable Chemistry & Engineering, 7(3), 3511-3519.
  • Saville, A., & Ristaino, J. B. (2019). Genetic structure and subclonal variation of extant and recent US lineages of Phytophthora infestans. Phytopathology, 109(9), 1614-1627.
  • Scarpassa, V. M., Debat, H. J., Alencar, R. B., Saraiva, J. F., Calvo, E., Arcà, B., & Ribeiro, J. (2019). An insight into the sialotranscriptome and virome of Amazonian anophelines. BMC genomics, 20(1), 1-13.
  • Sharanowski, B. J., Peixoto, L., Dal Molin, A., & Deans, A. R. (2019). Multi-gene phylogeny and divergence estimations for Evaniidae (Hymenoptera). PeerJ, 7, e6689.
  • Shi, R., Hubert, H., Dexter-Boone, A., Zeng, J., Kernodle, S. P., & Lewis, R. S. (2019). Identification and validation of SNP markers associated with Wz-mediated Phytophthora nicotianae resistance in Nicotiana tabacum L. Molecular Breeding, 39(7), 1-9.
  • Showalter, R., Adat, I., Raab, R., & Temple, L. (2019). Complete genome sequence of Bacillus amyloliquefaciens bacteriophage Ray17. Microbiology Resource Announcements, 8(15), e00134-19.
  • Singh, A., Faber-Hammond, J. J., O’Rourke, C. F., & Renn, S. C. (2019). Gut microbial diversity increases with social rank in the African cichlid fish, Astatotilapia burtoni. Animal Behaviour, 152, 79-91.
  • Tam, H. W., Hall, J. R., Messenger, Z. J., Jima, D. D., House, J. S., Linder, K., & Smart, R. C. (2019). C/EBPβ suppresses keratinocyte autonomous type 1 IFN response and p53 to increase cell survival and susceptibility to UVB-induced skin cancer. Carcinogenesis, 40(9), 1099-1109.
  • Worthington, M. L., Aryal, R., Bassil, N. V., Mead, D., Fernandez, G. E., Clark, J. R., … & Ashrafi, H. (2019, June). Development of new genomic resources and tools for molecular breeding in blackberry. In XII I8nternational Rubus and Ribes Symposium: Innovative Rubus and Ribes Production for High Quality Berries in Changing 1277 (pp. 39-46).
  • Ye, W., Robbins, R. T., & Kirkpatrick, T. (2019). Molecular characterization of root-knot nematodes (Meloidogyne spp.) from Arkansas, USA. Scientific reports, 9(1), 1-21.
  • Zeldes, B. M., Loder, A. J., Counts, J. A., Haque, M., Widney, K. A., Keller, L. M., … & Kelly, R. M. (2019). Determinants of sulphur chemolithoautotrophy in the extremely thermoacidophilic Sulfolobales. Environmental microbiology, 21(10), 3696-3710.
  • Arambula, S. E., Jima, D., & Patisaul, H. B. (2018). Prenatal bisphenol A (BPA) exposure alters the transcriptome of the neonate rat amygdala in a sex-specific manner: a CLARITY-BPA consortium study. Neurotoxicology, 65, 207-220.
  • Arniella M.B., Fitak R.R., Johnsen, S. (2018) Unmapped sequencing reads identify additional candidate genes linked to magnetoreception in rainbow trout. Environ Biol Fish 101: 711.
  • Blanco‐Meneses M., Carbone I., Ristaino JB. (2018) Population structure and migration of the Tobacco Blue Mold Pathogen, Peronospora tabacina, into North America and Europe. Mol Ecol. 27:737–751.
  • Bushakra, J. M., Dossett, M., Carter, K. A., Vining, K. J., Lee, J. C., Bryant, D. W., … & Bassil, N. V. (2018). Characterization of aphid resistance loci in black raspberry (Rubus occidentalis L.). Molecular breeding, 38(7), 83.
  • Cowley M., Skaar D. A., Jima D. D., Maguire R. L., Hudson K. M., Park S. S., . . . Hoyo, C. (2018). Effects of cadmium exposure on DNA methylation at imprinting control regions and genome-wide in mothers and newborn children. Environmental Health Perspectives (Online), 126 (3) doi:http://dx.doi.org/10.1289/EHP2085
  • Chu F.‐C., Klobasa W., Grubbs N., Lorenzen M.D. (2018) Development and use of a piggyBac‐based jumpstarter system in Drosophila suzukii. Arch Insect Biochem Physiol. 97:e21439.
  • Davis, R. J., Belikoff, E. J., Scholl, E. H., Li, F., & Scott, M. J. (2018). no blokes is essential for male viability and X chromosome gene expression in the Australian sheep blowfly. Current Biology, 28(12), 1987-1992.
  • Douros, J. D., Baltzegar, D. A., Reading, B. J., Seale, A. P., Lerner, D. T., Grau, E. G., & Borski, R. J. (2018). Leptin stimulates cellular glycolysis through a STAT3 dependent mechanism in tilapia. Frontiers in endocrinology, 9.
  • Dums, J. T., Murphree, C. A., Vasani, N., Young, D., & Sederoff, H. (2018). Metabolic and Transcriptional Profiles of Dunaliella viridis Supplemented with Ammonium Derived from Glutamine. Frontiers in Marine Science, 5, 311.
  • Farrow III, J. M., Wells, G., & Pesci, E. C. (2018). Desiccation tolerance in Acinetobacter baumannii is mediated by the two-component response regulator BfmR. PloS one, 13(10), e0205638.
  • Fritz, M. L., DeYonke, A. M., Papanicolaou, A., Micinski, S., Westbrook, J., & Gould, F. (2018). Contemporary evolution of a Lepidopteran species, Heliothis virescens, in response to modern agricultural practices. Molecular ecology, 27(1), 167-181.
  • Gilbert M.K., Medina A., Mack B.M, Lebar M.D., Rodríguez A., Bhatnagar D., Magan N., Obrian G., Payne G. (2018) Carbon Dioxide Mediates the Response to Temperature and Water Activity Levels in Aspergillus flavus during Infection of Maize Kernels. Toxins 10(1): 5.
  • Gillung, J. P., Winterton, S. L., Bayless, K. M., Khouri, Z., Borowiec, M. L., Yeates, D., … & Mayer, C. (2018). Anchored phylogenomics unravels the evolution of spider flies (Diptera, Acroceridae) and reveals discordance between nucleotides and amino acids. Molecular phylogenetics and evolution, 128, 233-245.
  • Hicks, J. A., Trakooljul, N., & Liu, H. C. (2018). Alterations in cellular and viral microRNA and cellular gene expression in Marek’s disease virus-transformed T-cell lines treated with sodium butyrate. Poultry science.
  • Holloway, H.M.P., Yu, X., Dunne, J.C. et al. (2018) A SNP-based high-density linkage map of zoysiagrass (Zoysia japonica Steud.) and its use for the identification of QTL associated with winter hardiness.Mol Breeding 38: 10.
  • Hughes, R. A., Jin, X., Zhang, Y., Zhang, R., Tran, S., Williams, P. G., … & Miller, E. S. (2018). Genome sequence, metabolic properties and cyanobacterial attachment of Porphyrobacter sp. HT-58-2 isolated from a filamentous cyanobacterium–microbial consortium. Microbiology, 164(10), 1229-1239.
  • Hurley F.J., He X., Wang L., de los Reyes F.L. (2018) Kenaf addition has mixed effects on process performance of sequencing batch reactors treating municipal wastewater. Environ Sci: Water Res Technol 4: 711-720.
  • Lee, M., Puglisi, K. M., Cohort, U. S. B., Erill, I., & Caruso, S. M. (2018). Complete genome sequences of HonestAbe, Anthony, and Taffo16, three cluster C Bacillus cereus group bacteriophages. Genome Announc., 6(25), e00493-18.
  • Messenger, Z. J., Hall, J. R., Jima, D. D., House, J. S., Tam, H. W., Tokarz, D. A., & Smart, R. C. (2018). C/EBPβ deletion in oncogenic Ras skin tumors is a synthetic lethal event. Cell death & disease, 9(11), 1054.
  • Munganyinka E., Ateka E.M., Kihurani A.W., Kanyange M.C., Tairo, F., Sseruwagi P., Ndunguru J. (2018) Cassava brown streak disease in Rwanda, the associated viruses and disease phenotypes. Plant Pathol 67(2): 377-387.
  • Perner J., Kropáčková S., Kopáček P., Ribeiro J.M.C. (2018) Sialome diversity of ticks revealed by RNAseq of single tick salivary glands. PLOS Neglected Tropical Diseases 12(4): e0006410.
  • Reynolds R.G., Puente-Rolón A.R., Burgess J.P., Baker B.O. (2018) Rediscovery and a Redescription of the Crooked-Acklins Boa, Chilabothrus schwartzi (Buden, 1975), Comb. Nov. Breviora 558 (1): 1-16
  • Reynolds R.G., Puente-Rolón A.R., Castle A.L., Van De Schoot M., and Geneva A.J. (2018) Herpetofauna of Cay Sal Bank, Bahamas and Phylogenetic Relationships of Anolis fairchildi, Anolis sagrei, and Tropidophis curtus from the Region. Breviora 560 (1): 1-19.
  • Ribeiro J.M.C., Martin-Martin I., Moreira F.R., Bernard K.A., Calvo E. (2018) A deep insight into the male and female sialotranscriptome of adult Culex tarsalis mosquitoes. Insect Biochem Mol Biol 95:1-9
  • Rock K.D., Horman B., Phillips A.L., McRitchie S.L., Watson S., Deese-Spruill J., Jima D., Sumner S., Stapleton H.M., Patisaul H.B. (2018) Molecular effects of developmental FM 550 exposure in Wistar rat placenta and fetal forebrain. Endocr Connect 7(2):305-324.
  • Ruark, C. L., Gardner, M., Mitchum, M. G., Davis, E. L., & Sit, T. L. (2018). Novel RNA viruses within plant parasitic cyst nematodes. PLoS One, 13 (3):e0193881
  • Sanglard, L. P., Nascimento, M., Moriel, P., Sommer, J., Ashwell, M., Poore, M. H., … & Serão, N. V. (2018). Impact of energy restriction during late gestation on the muscle and blood transcriptome of beef calves after preconditioning. BMC genomics, 19(1), 702.
  • Schweikert L.E., Fitak R.R., Johnsen S. (2018) De novo transcriptomics reveal distinct phototransduction signaling components in the retina and skin of a color-changing vertebrate, the hogfish (Lachnolaimus maximus). J Comp Physiol A 204 (5): 475–485.
  • Shi, R., Lewis, R. S., & Panthee, D. R. (2018). Filter paper-based spin column method for cost-efficient DNA or RNA purification. PloS one, 13(12), e0203011.
  • Slowan-Pomeroy, T. (2018). Phage Diversity of Six Mycobacteriophages and Host Range of 105 Mycobacteriophages in Four Mycobacteria Including Mycobacterium Tuberculosis H37Ra (Doctoral dissertation).
  • Thoemmes, M. S., Stewart, F. A., Hernandez-Aguilar, R. A., Bertone, M. A., Baltzegar, D. A., Borski, R. J., … & Dunn, R. R. (2018). Ecology of sleeping: the microbial and arthropod associates of chimpanzee beds. Royal Society open science, 5(5), 180382.
  • Twesigye, C. K., Ssekatawa, K., Kiggundu, A., Tushemereirwe, W., & Matovu, E. (2018). Variation among banana weevil Cosmopolites sordidus (Germar) populations in Uganda as revealed by AFLP markers and corm damage differences. Agriculture & Food Security, 7(1), 76.
  • Ubels J.L., DeJong R.J., Hoolsema B., Wurzberger A., Nguyen T.T., Blankespoor H.D., Blankespoor C.L. (2018) Impairment of retinal function in yellow perch (Perca flavescens) by Diplostomum baeri metacercariae. Int J Parasitology: Parasites and Wildlife 7(2): 171-179.
  • Wang J.P., Matthews M.L., Williams C.M., Shi R., … Sederoff R., Chiang V.L. (2018) Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis. Nat Commun Apr 20; 9(1):1579.
  • Withrow, J. M., & Tarpy, D. R. (2018). Cryptic “royal” subfamilies in honey bee (Apis mellifera) colonies. PloS one, 13(7), e0199124.
  • Wu, S., Lau, K. H., Cao, Q., Hamilton, J. P., Sun, H., Zhou, C., … & Crisovan, E. (2018). Genome sequences of two diploid wild relatives of cultivated sweetpotato reveal targets for genetic improvement. Nature communications, 9(1), 4580.
  • Andres, R. J., Coneva, V., Frank, M. H., Tuttle, J. R., Samayoa, L. F., Han, S. W., … & Rojas-Pierce, M. (2017). Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.). Proceedings of the National Academy of Sciences, 114(1), E57-E66.
  • Chu, F., Klobasa, W., Wu, P., Pinzi, S., Grubbs, N., Gorski, S., … & Lorenzen, M. D. (2017). Germline transformation of the western corn rootworm, Diabrotica virgifera virgifera. Insect Molecular Biology.
  • Fritz, M. L., Deyonke, A. M., Papanicolaou, A., Micinski, S., Westbrook, J., & Gould, F. (2017). Contemporary evolution of a Lepidopteran species, Heliothis virescens, in response to modern agricultural practices. bioRxiv, 103382.
  • Hengyou Z., Bao-Hua S. (2017) RNA-seq data comparisons of wild soybean genotypes in response to soybean cyst nematode (Heterodera glycines).Genomics Data 14: 36-39.
  • Hicks J.A., Porter T.E., Liu H.C. (2017) Identification of microRNAs controlling hepatic mRNA levels for metabolic genes during the metabolic transition from embryonic to posthatch development in the chicken. BMC Genomics 18: 687.
  • Hughes R., Zhang Y., Zhang R., Williams P.G., Lindsey J.S., Miller E.S. (2017) Genome Sequence and Composition of a Tolyporphin-Producing Cyanobacterium-MicrobialCommunity. Appl Environ Microbiol. 83(19) : e01068-17.
  • López-Uribe, M. M., Appler, R. H., Youngsteadt, E., Dunn, R. R., Frank, S. D., & Tarpy, D. R. (2017). Higher immunocompetence is associated with higher genetic diversity in feral honey bee colonies (Apis mellifera). Conservation Genetics, 1-8.
  • Mochizuki, H., Thomas, R., Moroff, S., & Breen, M. (2017). Genomic profiling of canine mast cell tumors identifies DNA copy number aberrations associated with KIT mutations and high histological grade. Chromosome Research, 1-15.
  • Parsons, C., Lee, S., Jayeola, V., & Kathariou, S. (2017). Novel Cadmium Resistance Determinant in Listeria monocytogenes. Applied and environmental microbiology, 83(5), e02580-16.
  • Pettersson, M., Frampton, J., Rönnberg, J., Shew, H. D., Benson, D. M., Kohlway, W. H., … & Cubeta, M. A. (2017). Increased diversity of Phytophthora species in Fraser fir Christmas tree plantations in the Southern Appalachians. Scandinavian Journal of Forest Research, 32(5), 412-420.
  • Rivera-Serrano, E. E., Fritch, E. J., Scholl, E. H., & Sherry, B. (2017). A cytoplasmic RNA virus alters the function of the cell splicing protein SRSF2. Journal of Virology, JVI-02488.
  • Saville A., Charles M., Chavan S., Muñoz M., Gómez-Alpizar L., Ristaino J.B. (2017) Population Structure of Pseudocercospora fijiensis in Costa Rica Reveals Shared Haplotype Diversity with Southeast Asian Populations. Phytopathology 107(12): 1541-1548.
  • Scruggs, A. C., Basaiah, T., Adams, M., & Quesada-Ocampo, L. M. (2017). Genetic diversity, fungicide sensitivity, and host resistance to Ceratocystis fimbriata infecting sweetpotato in North Carolina. Plant Disease, (ja).
  • Shi, R., Wang, J. P., Lin, Y. C., Li, Q., Sun, Y. H., Chen, H., … & Chiang, V. L. (2017). Tissue and cell-type co-expression networks of transcription factors and wood component genes in Populus trichocarpa. Planta, 1-12.
  • Shu X., Livingston D.P., Woloshuk C.P., Payne G.A. (2017) Comparative Histological and Transcriptional Analysis of Maize Kernels Infected with Aspergillus flavus and Fusarium verticillioides. Frontiers in Plant Science 8:2075
  • Skelly, D. A., McCusker, J. H., Stone, E. A., & Magwene, P. M. (2017). Private haplotype barcoding facilitates inexpensive high-resolution genotyping of multiparent crosses. bioRxiv, 116582.
  • Sun, Y. H., Hung, C. Y., Qiu, J., Chen, J., Kittur, F. S., Oldham, C. E., … & Xie, J. (2017). Accumulation of high OPDA level correlates with reduced ROS and elevated GSH benefiting white cell survival in variegated leaves. Scientific Reports, 7, 44158.
  • Tairo F., Mbewe W. K., Mark D., Lupembe M., Sseruwagi P., Ndunguru, J. (2017). Phylogenetic characterization of East African cassava mosaic begomovirus (Geminiviridae) isolated from Manihot carthaginensis subsp. glaziovii (Müll.Arg.) Allem., from a non-cassava growing region in Tanzania. African J Biotechnol 16(36), 1826-1831.
  • Thomas, A., Carbone, I., Choe, K., Quesada‐Ocampo, L. M., & Ojiambo, P. S. (2017). Resurgence of cucurbit downy mildew in the United States: Insights from comparative genomic analysis of Pseudoperonospora cubensis. Ecology and Evolution.
  • Vining, K. J., Salinas, N., Tennessen, J. A., Zurn, J. D., Sargent, D. J., Hancock, J., & Bassil, N. V. (2017). Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families. PeerJ Preprints, 5, e2975v1.
  • Waldeck, N., Burkey, K., Carter, T., Dickey, D., Song, Q., & Taliercio, E. (2017). RNA-Seq study reveals genetic responses of diverse wild soybean accessions to increased ozone levels. BMC genomics, 18(1), 498.
  • Zhang, X., Yang, Q., Rucker, E., Thomason, W., & Balint-Kurti, P. (2017). Fine mapping of a quantitative resistance gene for gray leaf spot of maize (Zea mays L.) derived from teosinte (Z. mays ssp. parviglumis). Theoretical and Applied Genetics, 1-11.
  • Arambula, S. E., Belcher, S. M., Planchart, A., Turner, S. D., & Patisaul, H. B. (2016). Impact of Low Dose Oral Exposure to Bisphenol A (BPA) on the Neonatal Rat Hypothalamic and Hippocampal Transcriptome: A CLARITY-BPA Consortium Study. Endocrinology, 157(10), 3856-3872.
  • Burford Reiskind, M. O., Coyle, K., Daniels, H. V., Labadie, P., Reiskind, M. H., Roberts, N. B., … & Vargo, E. L. (2016). Development of a universal double‐digest RAD sequencing approach for a group of nonmodel, ecologically and economically important insect and fish taxa. Molecular Ecology Resources.
  • Christiaens, O., Prentice, K., Pertry, I., Ghislain, M., Bailey, A., Niblett, C., … & Smagghe, G. (2016). RNA interference: a promising biopesticide strategy against the African Sweetpotato Weevil Cylas brunneus. Scientific Reports, 6.
  • Friedenberg, S. G., & Meurs, K. M. (2016). Genotype imputation in the domestic dog. Mammalian Genome, 1-10.
  • Friedenberg, S. G., Chdid, L., Keene, B., Sherry, B., Motsinger-Reif, A., & Meurs, K. M. (2016). Use of RNA-seq to identify cardiac genes and gene pathways differentially expressed between dogs with and without dilated cardiomyopathy. American Journal of Veterinary Research, 77(7), 693-699.
  • Fritz, M. L., Paa, S., Baltzegar, J., & Gould, F. (2016). Application of a dense genetic map for assessment of genomic responses to selection and inbreeding in Heliothis virescens. Insect molecular biology.
  • Hamilton, T. L., Bovee, R. J., Sattin, S. R., Mohr, W., Gilhooly III, W. P., Lyons, T. W., … & Macalady, J. L. (2016). Carbon and sulfur cycling below the chemocline in a meromictic lake and the identification of a novel taxonomic lineage in the FCB superphylum, Candidatus Aegiribacteria. Frontiers in microbiology, 7.
  • Harrell, E. A., & Miller, E. S. (2016). Genome sequence of Aeromicrobium erythreum NRRL B-3381, an erythromycin-producing bacterium of the Nocardioidaceae. Genome announcements, 4(2), e00300-16.
  • Horn, B. W., Gell, R. M., Singh, R., Sorensen, R. B., & Carbone, I. (2016). Sexual reproduction in Aspergillus flavus sclerotia: Acquisition of novel alleles from soil populations and uniparental mitochondrial inheritance. PloS one, 11(1).
  • Hung, C. Y., Qiu, J., Sun, Y. H., Chen, J., Kittur, F. S., Henny, R. J., … & Xie, J. (2016). Gibberellin deficiency is responsible for shy-flowering nature of Epipremnum aureum. Scientific Reports, 6.
  • Morita, S. I., Bayless, K. M., Yeates, D. K., & Wiegmann, B. M. (2016). Molecular phylogeny of the horse flies: a framework for renewing tabanid taxonomy. Systematic Entomology, 41(1), 56-72.
  • Musungu, B. M., Bhatnagar, D., Brown, R. L., Payne, G. A., OBrian, G., Fakhoury, A. M., & Geisler, M. (2016). A Network Approach of Gene Co-expression in the Zea mays/Aspergillus flavus Pathosystem to Map Host/Pathogen Interaction Pathways. Frontiers in Genetics, 7.
  • Noar, R. D., & Daub, M. E. (2016). Bioinformatics Prediction of Polyketide Synthase Gene Clusters from Mycosphaerella fijiensis. PloS one, 11(7), e0158471.
  • Noar, R. D., & Daub, M. E. (2016). Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes. BMC genomics, 17(1), 690.
  • Parsons, Cameron, Sangmi Lee, Victor Jayeola, and Sophia Kathariou. “Characterization of a novel cadmium resistance determinant in Listeria monocytogenes.” Applied and Environmental Microbiology (2016): AEM-02580.
  • Perner, J., Provazník, J., Schrenková, J., Urbanová, V., Ribeiro, J. M., & Kopáček, P. (2016). RNA-seq analyses of the midgut from blood-and serum-fed Ixodes ricinus ticks. Scientific Reports, 6.
  • Pettersson, M., Frampton, J., Rönnberg, J., Shew, H. D., Benson, D. M., Kohlway, W. H., … & Cubeta, M. A. (2016). Increased diversity of Phytophthora Species in Fraser fir Christmas Tree Plantations in the Southern Appalachians. Scandinavian Journal of Forest Research, (just-accepted), 1-32.
  • Reveille, A. M., Eldridge, K. A., & Temple, L. M. (2016). Complete genome sequence of Bacillus megaterium bacteriophage Eldridge. Genome announcements, 4(2), e01728-15.
  • Roberts, N. B., Juntti, S. A., Coyle, K. P., Dumont, B. L., Stanley, M. K., Ryan, A. Q., … & Roberts, R. B. (2016). Polygenic sex determination in the cichlid fish Astatotilapia burtoni. BMC genomics, 17(1), 835.
  • Saville, A. C., Martin, M. D., & Ristaino, J. B. (2016). Historic Late Blight Outbreaks Caused by a Widespread Dominant Lineage of Phytophthora infestans (Mont.) de Bary. PloS one, 11(12), e0168381.
  • Schwartz, S., Truglio, M., Scott, M. J., & Fitzsimons, H. L. (2016). Long-term Memory in Drosophila Is Influenced by the Histone Deacetylase HDAC4 Interacting with the SUMO-Conjugating Enzyme Ubc9. Genetics, genetics-115.
  • Scruggs, Andrew C., and Lina Maria Quesada-Ocampo. (2016). Etiology and epidemiological conditions promoting Fusarium Root Rot in sweetpotato.” Phytopathology 2016 Apr 6. [Epub ahead of print].
  • Spears, P. A., Havell, E. A., Hamrick, T. S., Goforth, J. B., Levine, A. L., Abraham, S. T., … & Orndorff, P. E. (2016). Listeria monocytogenes wall teichoic acid decoration in virulence and cell‐to‐cell spread. Molecular microbiology Feb 12. doi: 10.1111/mmi.13353. [Epub ahead of print]
  • Villarino, G. H., Hu, Q., Manrique, S., Flores-Vergara, M., Sehra, B., Robles, L., … & Heber, S. (2016). Transcriptomic Signature of the SHATTERPROOF2 Expression Domain Reveals the Meristematic Nature of Arabidopsis Gynoecial Medial Domain. Plant physiology, 171(1), 42-61.
  • Wang, G. F., & Balint-Kurti, P. J. (2016). Maize homologs of CCoAOMT and HCT, two key enzymes in lignin biosynthesis, form complexes with the NLR Rp1 protein to modulate the defense response. Plant physiology, 171(3), 2166-2177.
  • Watts, M., Winkler, I. S., Daugeron, C., de Carvalho, C. J., Turner, S. P., & Wiegmann, B. M. (2016). Where do the neotropical Empidini lineages (Diptera: Empididae: Empidinae) fit in a worldwide context? Molecular phylogenetics and evolution, 95, 67-78.
  • Yoder, A. D., Campbell, C. R., Blanco, M. B., dos Reis, M., Ganzhorn, J. U., Goodman, S. M., … & Ralison, J. M. (2016). Geogenetic patterns in mouse lemurs (genus Microcebus) reveal the ghosts of Madagascar’s forests past. Proceedings of the National Academy of Sciences, 201601081.
  • Zambrana-Echevarría, C., De Jesús-Kim, L., Márquez-Karry, R., Siritunga, D., & Jenkins, D. (2016). Diversity of Papaya ringspot virus Isolates in Puerto Rico. HortScience, 51(4), 362-369.
  • Burke, M., Scholl, E. H., Bird, D. M., Schaff, J. E., Coleman, S., Crowell, R., … & Windham, E. (2015). The plant parasite Pratylenchus coffeae carries a minimal nematode genome. Nematology, 17(6), 621-637.
  • Carson, S., Bruff, E., DeFoor, W., Dums, J., Groth, A., Hatfield, T., … & Miller, E. S. (2015). Genome sequences of six Paenibacillus larvae Siphoviridae phages. Genome Announcements, 3(3), e00101-15.
  • Gupta, V., Estrada, A. D., Blakley, I., Reid, R., Patel, K., Meyer, M. D., … & Loraine, A. E. (2015). RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing. GigaScience, 4:5, 1-22.
  • Haseyama, K. L., Wiegmann, B. M., Almeida, E. A., & de Carvalho, C. J. (2015). Say goodbye to tribes in the new house fly classification: A new molecular phylogenetic analysis and an updated biogeographical narrative for the Muscidae (Diptera). Molecular phylogenetics and evolution, 89, 1-12.
  • Lewis, D. L., Notey, J. S., Chandrayan, S. K., Loder, A. J., Lipscomb, G. L., Adams, M. W., & Kelly, R. M. (2015). A mutant (‘lab strain’) of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology. Extremophiles, 19(2), 269-281.
  • Ma, D. M., Wang, Z., Wang, L., Alejos-Gonzales, F., Sun, M. A., & Xie, D. Y. (2015). A Genome-Wide Scenario of Terpene Pathways in Self-pollinated Artemisia annua. Molecular plant, 8(11), 1580-1598.
  • Mochizuki, H., Kennedy, K., Shapiro, S. G., & Breen, M. (2015). BRAF mutations in canine cancers. PloS One, 10(6), e0129534.
  • Perera, O. P., Shelby, K. S., Popham, H. J., Gould, F., Adang, M. J., & Jurat-Fuentes, J. L. (2015). Generation of a transcriptome in a model lepidopteran pest, Heliothis virescens, using multiple sequencing strategies for profiling midgut gene expression. PloS one, 10(6), e0128563.
  • Prentice, K., Pertry, I., Christiaens, O., Bauters, L., Bailey, A., Niblett, C., … & Smagghe, G. (2015). Transcriptome analysis and systemic RNAi response in the African Sweetpotato Weevil (Cylas puncticollis, Coleoptera, Brentidae). PloS One, 10(1), e0115336.
  • Sullivan, C.V., Chapman, R.W., Reading, B.J., and Anderson, P.E.(2015). Transcriptomics of egg quality in teleost fish: New developments and future directions. General and Comparative Endocrinology 221, 23-30.
  • Tuttle, J. R., Nah, G., Duke, M. V., Alexander, D. C., Guan, X., Song, Q., … & Haigler, C. H. (2015). Metabolomic and transcriptomic insights into how cotton fiber transitions to secondary wall synthesis, represses lignification, and prolongs elongation. BMC genomics, 16(1), 1.
  • Villarino, G. H., Flores-Vergara, M., Hu, Q., Sehra, B., Robles, L., Brumos, J., … & Heber, S. (2015). Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana. bioRxiv, 032128.
  • Wang, G. F., He, Y., Strauch, R., Olukolu, B. A., Nielsen, D., Li, X., & Balint-Kurti, P. J. (2015). Maize homologs of Hydroxycinnamoyltransferase, a key enzyme in Lignin Biosynthesis, bind the Nucleotide Binding Leucine-Rich Repeat Rp1 proteins to modulate the defense response. Plant physiology, 169(3), 2230-2243.
  • Wang, G. F., Ji, J., Ei-Kasmi, F., Dangl, J. L., Johal, G., & Balint-Kurti, P. J. (2015). Molecular and Functional Analyses of a Maize Autoactive NB-LRR Protein Identify Precise Structural Requirements for Activity. PLoS pathogens, 11(2), e1004674-e1004674.
  • Wang, G. F., & Balint-Kurti, P. (2015). Cytoplasmic and nuclear localizations are important for the hypersensitive response conferred by maize autoactive Rp1-D21 protein. Molecular Plant-Microbe Interactions
  • Wong, R. Y., Lamm, M. S., & Godwin, J. (2015). Characterizing the neurotranscriptomic states in alternative stress coping styles. BMC genomics, 16(1), 425.
  • Wong, R. Y., & Godwin, J. (2015). Neurotranscriptome profiles of multiple zebrafish strains. Genomics data, 5, 206-209.
  • Ye, W., Zeng, Y., & Kerns, J. (2015). Molecular characterization and diagnosis of Root-Knot Nematodes (Meloidogyne spp.) from Turfgrasses in North Carolina, USA. PloS one, 10(11), e0143556.
  • Zeng, Y., Ye, W., Kerns, J., Tredway, L., Martin, S., & Martin, M. (2015). Molecular characterization and phylogenetic relationships of plant-parasitic nematodes associated with Turfgrasses in North Carolina and South Carolina, United States. Plant Disease, PDIS-10.
  • Baugher, J. L., Durmaz, E., & Klaenhammer, T. R. (2014). Spontaneously induced prophages in Lactobacillus gasseri contribute to horizontal gene transfer. Applied and Environmental Microbiology, 80(11), 3508-3517.
  • Egekwu, N., Sonenshine, D. E., Bissinger, B. W., & Roe, R. M. (2014). Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems. PLoS One, 9(7), e102667.
  • Jacob, M. E., Bai, J., Renter, D. G., Rogers, A. T., Shi, X., & Nagaraja, T. G. (2014). Comparing real-time and conventional PCR to culture-based methods for detecting and quantifying Escherichia coli O157 in cattle feces. Journal of Food Protection, 77(2), 314-319.
  • Marks, T. J., & Hamilton, P. T. (2014). Characterization of a thermophilic bacteriophage of Geobacillus kaustophilus. Archives of Virology, 159(10), 2771-2775.
  • Mulkey, S. E., Zuleta, M., Keebler, J. E., Schaff, J. E., & Milla-Lewis, S. R. (2014). Development and characterization of simple sequence repeat markers for St. Augustine grass. Crop Science, 54(1), 401-412.
  • Reading, B. J., Hiramatsu, N., Schilling, J., Molloy, K. T., Glassbrook, N., Mizuta, H., … & Sullivan, C. V. (2014). Lrp13 is a novel vertebrate lipoprotein receptor that binds vitellogenins in teleost fishes. Journal of Lipid Research, 55(11), 2287-2295.
  • Schilling, J., Nepomuceno, A., Schaff, J. E., Muddiman, D. C., Daniels, H. V., & Reading, B. J. (2014). Compartment proteomics analysis of white perch (Morone americana) ovary using support vector machines. Journal of Proteome Research, 13(3), 1515-1526.
  • Boncristiani, H. F., Evans, J. D., Chen, Y., Pettis, J., Murphy, C., Lopez, D. L., … & Rueppell, O. (2013). In vitro infection of pupae with Israeli acute paralysis virus suggests disturbance of transcriptional homeostasis in honey bees (Apis mellifera). PLoS One, 8(9), e73429.
  • Bruno-Barcena, J. M., Chinn, M. S., & Grunden, A. M. (2013). Genome sequence of the autotrophic acetogen Clostridium autoethanogenum JA1-1 strain DSM 10061, a producer of ethanol from carbon monoxide. Genome Announcements, 1(4), e00628-13.
  • Chow C.Y., Wolfner M.F., Clark A.G. (2013) Large neurological component to genetic differences underlying biased sperm use in Drosophila. Genetics 193(1):177-85.
  • Goher, M., Hicks, J. A., & Liu, H. C. (2013). The interplay between MDV and HVT affects viral miRNa expression. Avian Diseases, 57(2s1), 372-379.
  • Hicks, J. A., Yoo, D., & Liu, H. C. (2013). Characterization of the microRNAome in porcine reproductive and respiratory syndrome virus infected macrophages. PloS One, 8(12), e82054.
  • Singh, N. D., Jensen, J. D., Clark, A. G., & Aquadro, C. F. (2013). Inferences of demography and selection in an African population of Drosophila melanogaster. Genetics, 193(1), 215-228.
  • Wong, R. Y., Oxendine, S. E., & Godwin, J. (2013). Behavioral and neurogenomic transcriptome changes in wild-derived zebrafish with fluoxetine treatment. BMC Genomics, 14(1), 348.
  • Zhang, J., Franks, R. G., Liu, X., Kang, M., Keebler, J. E., Schaff, J. E., … & Xiang, Q. Y. J. (2013). De novo sequencing, characterization, and comparison of inflorescence transcriptomes of Cornus canadensis and C. florida (Cornaceae). PLoS One, 8(12), e82674.
  • Jeffers, L. A., Shen, H., Khalil, S., Bissinger, B. W., Brandt, A., Gunnoe, T. B., & Roe, R. M. (2012). Enhanced activity of an insecticidal protein, trypsin modulating oostatic factor (TMOF), through conjugation with aliphatic polyethylene glycol. Pest Management Science, 68(1), 49-59.
  • Morckel, A. R., Lusic, H., Farzana, L., Yoder, J. A., Deiters, A., & Nascone-Yoder, N. M. (2012). A photoactivatable small-molecule inhibitor for light-controlled spatiotemporal regulation of Rho kinase in live embryos. Development, 139(2), 437-442.
  • Reading, B. J., Chapman, R. W., Schaff, J. E., Scholl, E. H., Opperman, C. H., & Sullivan, C. V. (2012). An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis), a highly advanced perciform fish. BMC Research Notes, 5(1), 111.
  • Rodrigues da Cunha, L., Ferreira, C. L. F., Durmaz, E., Goh, Y. J., Sanozky-Dawes, R., & Klaenhammer, T. (2012). Characterization of Lactobacillus gasseri isolates from a breast-fed infant. Gut microbes, 3(1), 15-24.
  • Staley, B.F., de los Reyes, F.L., & Barlaz, M.A. (2012) Comparison of Bacteria and Archaea communities in municipal solid waste, individual refuse components, and leachate. FEMS Microbiology and Ecology, 79(2), 465-73.
  • Tarpy, D. R., Keller, J. J., Caren, J. R., & Delaney, D. A. (2012). Assessing the mating ‘health’ of commercial honey bee queens. Journal of Economic Entomology, 105(1), 20-25.
  • Thelwall, P. E., Simpson, N. E., Rabbani, Z. N., Clark, M. D., Pourdeyhimi, R., Macdonald, J. M., … & Gamcsik, M. P. (2012). In vivo MR studies of glycine and glutathione metabolism in a rat mammary tumor. NMR in Biomedicine, 25(2), 271-278.
  • Thomas, V. P., Fudali, S. L., Schaff, J. E., Liu, Q., Scholl, E. H., Opperman, C. H., … & Williamson, V. M. (2012). A sequence-anchored linkage map of the plant–parasitic nematode Meloidogyne hapla reveals exceptionally high genome-wide recombination. Genetics, 2(7), 815-824.
  • De Vries, B. D., Fehr, W. R., Welke, G. A., & Dewey, R. E. (2011). Molecular characterization of the mutant (A22) allele for reduced palmitate concentration in soybean. Crop Science, 51(4), 1611-1616.
  • Gamcsik, M. P., Clark, M. D., Ludeman, S. M., Springer, J. B., D’Alessandro, M. A., Simpson, N. E., … & Thelwall, P. E. (2011). Non-invasive monitoring of L-2-oxothiazolidine-4-carboxylate metabolism in the rat brain by in vivo 13C magnetic resonance spectroscopy. Neurochemical Research, 36(3), 443-451.
  • Staley, B. F., Francis, L., & Barlaz, M. A. (2011). Effect of spatial differences in microbial activity, pH, and substrate levels on methanogenesis initiation in refuse. Applied and Environmental Microbiology, 77(7), 2381-2391.
  • Torres-Barragan, A., Suazo, A., Buhler, W. G., & Cardoza, Y. J. (2011). Studies on the entomopathogenicity and bacterial associates of the nematode Oscheius carolinensis. Biological Control, 59(2), 123-129.
  • Trautwein, M. D., Wiegmann, B. M., & Yeates, D. K. (2011). Overcoming the effects of rogue taxa: Evolutionary relationships of the bee flies. PLoS Currents, 3, RRN1233.
  • Wiegmann, B. M., Trautwein, M. D., Winkler, I. S., Barr, N. B., Kim, J. W., Lambkin, C., … & Yeates, D. K. (2011). Episodic radiations in the fly tree of life. Proceedings of the National Academy of Sciences, 108(14), 5690-5695.
  • Blumer-Schuette, S. E., Lewis, D. L., & Kelly, R. M. (2010). Phylogenetic, microbiological, and glycoside hydrolase diversities within the extremely thermophilic, plant biomass-degrading genus Caldicellulosiruptor. Applied and Environmental Microbiology, 76(24), 8084-8092.
  • Georgianna, D., Fedorova, N. D., Burroughs, J. L., Dolezal, A. L., Bok, J. W., Horowitz-Brown, S. I. G. A. L., … & Payne, G. A. (2010). Beyond aflatoxin: four distinct expression patterns and functional roles associated with Aspergillus flavus secondary metabolism gene clusters. Molecular Plant Pathology, 11(2), 213-226.
  • Joo, H., Choi, K., & Hodgson, E. (2010). Human metabolism of atrazine. Pesticide Biochemistry and Physiology, 98(1), 73-79.
  • le Roux, L. D., Johnson, M. E., Jason So, M., & de los Reyes, F. L. (2010) Use of molecular tools to identify microbial communities in a full scale biotrickling filter treating odors from a municipal WWTP. Proceedings of the Water Environment Federation, Odors and Air Pollutants 2010, 855-863.
  • Petersen, M. J., Bertone, M. A., Wiegmann, B. M., & Courtney, G. W. (2010). Phylogenetic synthesis of morphological and molecular data reveals new insights into the higher‐level classification of Tipuloidea (Diptera). Systematic Entomology, 35(3), 526-545.
  • Ponnusamy, L., Wesson, D. M., Arellano, C., Schal, C., & Apperson, C. S. (2010). Species composition of bacterial communities influences attraction of mosquitoes to experimental plant infusions. Microbial Ecology, 59(1), 158-173.
  • Smith, M. P., Ponnusamy, L., Jiang, J., Ayyash, L. A., Richards, A. L., & Apperson, C. S. (2010). Bacterial pathogens in ixodid ticks from a Piedmont County in North Carolina: prevalence of rickettsial organisms. Vector-Borne and Zoonotic Diseases, 10(10), 939-952.
  • Tarpy, D. R., Caren, J. R., Delaney, D. A., Sammataro, D., Finley, J., Loper, G. M., & DeGrandi-Hoffman, G. (2010). Mating frequencies of Africanized honey bees in the south western USA. Journal of Apicultural Research, 49(4), 302-310.
  • Opperman, C. H., Bird, D. M., & Schaff, J. E. (2009). Genomic analysis of the root-knot nematode genome. In Cell Biology of Plant Nematode Parasitism (pp. 221-237). Springer Berlin Heidelberg.
  • Horn, B. W., Ramirez-Prado, J. H., & Carbone, I. (2009). Sexual reproduction and recombination in the aflatoxin-producing fungus Aspergillus parasiticus. Fungal Genetics and Biology, 46(2), 169-175.
  • Truong, V. D., Deighton, N., Thompson, R. T., McFeeters, R. F., Dean, L. O., Pecota, K. V., & Yencho, G. C. (2009). Characterization of anthocyanins and anthocyanidins in purple-fleshed sweetpotatoes by HPLC-DAD/ESI-MS/MS. Journal of Agricultural and Food Chemistry, 58(1), 404-410.
  • Wiegmann, B. M., Trautwein, M. D., Kim, J. W., Cassel, B. K., Bertone, M. A., Winterton, S. L., & Yeates, D. K. (2009). Single-copy nuclear genes resolve the phylogeny of the holometabolous insects. BMC Biology, 7(1), 34.
  • Zhou, S., Stone, E. A., Mackay, T. F., & Anholt, R. R. (2009). Plasticity of the chemoreceptor repertoire in Drosophila melanogaster. PLoS Genet, 5(10), e1000681.
  • Opperman, C. H., Bird, D. M., Williamson, V. M., Rokhsar, D. S., Burke, M., Cohn, J., … & Windham, E. (2008). Sequence and genetic map of Meloidogyne hapla: a compact nematode genome for plant parasitism. Proceedings of the National Academy of Sciences, 105(39), 14802-14807.